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Sample GSM1573014 Query DataSets for GSM1573014
Status Public on Jun 03, 2015
Title Motor Cortex of subject 267 (Sample174)
Sample type genomic
Source name Brain Motor Cortex
Organism Homo sapiens
Characteristics tissue: Brain Motor Cortex
subject id: 267
Sex: M
predicted gender: female
age: 45
dna methylation age: 38.6086199342301
age acceleration with respect to noncerebellar samples: -1.44460570304429
cor sample vs gold standard: 0.886420503919243
mean abs difference sample vs gold standard: 0.0893864413551623
postmortem interval: 12
Growth protocol DNA extracted from fresh frozen tissue
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified from fresh frozen tissue using the AllPrep DNA/RNA mini kit according to standard instructions.
Label Cy3 and Cy5
Label protocol Standard Illumina Protocol
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Data processing BeadStudio software v3.2.
Unmethylated and methylated signal intensities and detection p values included in Series supplementary file
Submission date Dec 24, 2014
Last update date Jun 03, 2015
Contact name Steve Horvath
Organization name University of California, Los Angeles
Department Human Genetics
Lab Horvath
Street address 695 Charles E. Young Drive South, Box 708822
City Los Angeles
State/province CA
ZIP/Postal code 90095-7088
Country USA
Platform ID GPL13534
Series (2)
GSE64509 DNA methylation profiles of human brain tissue samples
GSE64511 DNA methylation profiles of multiple human tissues

Data table header descriptions
VALUE Background corrected beta values resulting from BeadStudio

Data table
cg00000029 0.5320807
cg00000108 0.9154056
cg00000109 0.736204
cg00000165 0.1375595
cg00000236 0.8051205
cg00000289 0.6835405
cg00000292 0.7200064
cg00000321 0.4975264
cg00000363 0.1561043
cg00000622 0.02170611
cg00000658 0.7562515
cg00000714 0.100873
cg00000721 0.8686253
cg00000734 0.06459948
cg00000769 0.07132029
cg00000807 0.9000848
cg00000884 0.8032435
cg00000905 0.07451113
cg00000924 0.6505368
cg00000948 0.9080951

Total number of rows: 485577

Table truncated, full table size 10029 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

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