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Sample GSM15728 Query DataSets for GSM15728
Status Public on Jan 27, 2004
Title NeverSmoker 52
Sample type RNA
 
Source name Bronchial Epithelia
Organism Homo sapiens
Characteristics tissue: Bronchial Epithelium
Extracted molecule total RNA
Extraction protocol RNA was extracted by using TRIzol Reagent (Invitrogen) according to the manufacturer's protocol
Label protocol Affymetrix Suggested Protocol
 
Hybridization protocol Affymetrix Suggested Protocol
Scan protocol Affymetrix Suggested Protocol
Description Volunteer patients underwent bronchoscopy from which RNA was extracted using a commercial RNA extraction kit. Targets were produced using standard Affymetrix procedures from about 8ug of total RNA.
Keywords = Homo Sapiens, bronchial epithelia, molecular screen for smoking related changes to transcript levels in bronchial epithelia
Data processing MAS5.0 Scaled 100 generated expression value
 
Submission date Jan 24, 2004
Last update date Aug 18, 2014
Contact name Avrum Spira
E-mail(s) aspira@bu.edu
Phone 617-638-4860
Fax 617-536-8093
URL http://www.pulmonomics.com
Organization name Boston University Medical Center
Department Pulmonary and Critical Care Medicine
Lab Pulmonomics Lab
Street address 715 Albany Street, R304
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
 
Platform ID GPL96
Series (1)
GSE994 Effects of cigarette smoke on the human airway epithelial cell transcriptome
Relations
Reanalyzed by GSE60486

Data table header descriptions
ID_REF Affymetrix Probeset ID
VALUE MAS5.0 Scaled 100 generated expression value
DETECTION P-VALUE P-Value that indicates the significance level of the detection call

Data table
ID_REF VALUE DETECTION P-VALUE
1007_s_at 1380.800 0.000219
1053_at 6.000 0.918663
117_at 40.900 0.520620
121_at 631.400 0.014937
1255_g_at 10.800 0.458816
1294_at 260.100 0.001354
1316_at 98.000 0.107301
1320_at 6.500 0.951005
1405_i_at 73.300 0.364945
1431_at 49.000 0.138765
1438_at 125.500 0.066865
1487_at 328.500 0.073830
1494_f_at 236.400 0.005643
1598_g_at 618.900 0.002617
160020_at 262.700 0.021866
1729_at 250.700 0.000959
1773_at 10.900 0.861275
177_at 79.500 0.204022
179_at 711.400 0.081337
1861_at 88.700 0.127645

Total number of rows: 22215

Table truncated, full table size 587 Kbytes.




Supplementary file Size Download File type/resource
GSM15728.CEL.gz 2.9 Mb (ftp)(http) CEL

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