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Sample GSM1562924 Query DataSets for GSM1562924
Status Public on Jan 27, 2016
Title Hs_CNS_MRT (hIC2._.INI164)
Sample type RNA
 
Source name Atypical Teratoid and Rhabdoid Tumor
Organism Homo sapiens
Characteristics tissue: ATRT
Extracted molecule total RNA
Extraction protocol Total RNAs were collected from samples using the miRNeasy kit (Qiagen) according to the manufacturer's instructions
Label biotin
Label protocol According to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Description Hs_CNS_MRT
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.16.0.0, ENTREZG)
 
Submission date Dec 09, 2014
Last update date Mar 26, 2019
Contact name Wilfrid Richer
E-mail(s) wilfrid.richer@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platform ID GPL17810
Series (1)
GSE64019 Mouse Smarcb1-deficient models recapitulate subtypes of human rhabdoid tumors.
Relations
Reanalyzed by GSE111787

Data table header descriptions
ID_REF
VALUE log2 GC-RMA signal

Data table
ID_REF VALUE
1_at 4.505219299
10_at 2.159858401
100_at 3.38512112
1000_at 9.225152579
10000_at 4.743306762
100009676_at 2.130220595
10001_at 7.132841834
10002_at 2.426250692
10003_at 2.753439162
10004_at 2.279383467
100048912_at 2.231531813
100049716_at 2.422900694
10005_at 4.113255125
10006_at 8.075814914
10007_at 7.98118295
10008_at 2.487644247
10009_at 7.715133082
100093630_at 7.610348642
1001_at 4.152395
10010_at 6.718461198

Total number of rows: 18989

Table truncated, full table size 388 Kbytes.




Supplementary file Size Download File type/resource
GSM1562924_MD13_ARN0010_s1h1_U133p2.CEL.gz 4.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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