|
Status |
Public on Apr 30, 2015 |
Title |
lung, adenocarcinoma_18011 |
Sample type |
RNA |
|
|
Source name |
lung, adenocarcinoma
|
Organism |
Homo sapiens |
Characteristics |
patient_id1: 18011T patient_id: 18011 Sex: Female race: European American age: 83 disease state: non-small cell lung cancer (NSCLC) histology: adenocarcinoma 7th tnm stage: Ia tumor size (cm): 1 smoking status: ever smoking packyears: unknown kras status: WT tp53 mutation: WT death due to cancer: no survival after surgery (days): 2012
|
Extracted molecule |
total RNA |
Extraction protocol |
Total cellular RNA was extracted from tumor and matching adjacent non-tumor lung using miRNA Kit (QIAGEN). RNA quality was determined using Agilent Bioanalyzer. RNA was hybridized to Illumina HumanRef-8 v3 Expression Beadchip arrays.
|
Label |
Cy3
|
Label protocol |
Standard Illumina Protocol Illumina TotalPrep-96 RNA Amplification Kit (Life Technologies)
|
|
|
Hybridization protocol |
Labeled cRNA was hybridised to Illumina HumanRefseq8 v3
|
Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
Description |
adenocarcinoma
|
Data processing |
Genome Studio v2010.3
|
|
|
Submission date |
Nov 19, 2014 |
Last update date |
Apr 30, 2015 |
Contact name |
Ana I Robles |
E-mail(s) |
Ana_Robles@nih.gov
|
Phone |
301-496-1729
|
Organization name |
National Cancer Institute/NIH
|
Lab |
Laboratory of Human Carcinogenesis
|
Street address |
37 Convent Dr 37/3060D
|
City |
Bethesda |
State/province |
MD |
ZIP/Postal code |
20892 |
Country |
USA |
|
|
Platform ID |
GPL6883 |
Series (1) |
GSE63459 |
Multi-platform Characterization of Stage I Lung Adenocarcinoma (mRNA expression) |
|