|
Status |
Public on Jan 04, 2016 |
Title |
SU008 Blast 1 |
Sample type |
RNA |
|
|
Source name |
Bone marrow of AML patient
|
Organism |
Homo sapiens |
Characteristics |
surface markers: CD34- cell type: Leukemic blast (Blast)
|
Extracted molecule |
total RNA |
Extraction protocol |
Total RNA was extracted according to the manufacturer's protocol
|
Label |
biotin
|
Label protocol |
Standard Affymetrix IVT labeling protocol
|
|
|
Hybridization protocol |
Performed according to manufacturer's instructions
|
Scan protocol |
Scanning was done using an Affymetrix Gene Chip 3000 scanner, and processed into CEL files using Affymetrix GCOS software
|
Description |
Leukemic blast (Blast)
|
Data processing |
Raw CEL data were normalized in R/bioconductor using MAS5 with custom CDF (brainarray) version 16.0 of ENTREZG
|
|
|
Submission date |
Nov 13, 2014 |
Last update date |
Nov 14, 2018 |
Contact name |
Andrew Gentles |
Organization name |
Stanford University
|
Street address |
1201 Welch Road
|
City |
Stanford |
State/province |
CA |
ZIP/Postal code |
94305 |
Country |
USA |
|
|
Platform ID |
GPL17810 |
Series (1) |
GSE63270 |
Expression profiles of normal hematopoietic stem and progenitor cells and acute myeloid leukemia sub-populations |
|
Relations |
Reanalyzed by |
GSE122511 |