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Status
Public on Jan 17, 2004
Title
N-6_PRE
Sample type
RNA
Source name
Left Cardiac Ventricle
Organism
Homo sapiens Extracted molecule
total RNA
Description
19 paired human left ventricular apex samples were harvested at the time of implant of a left ventricular assist device (PRE) and at the time of explant (POST). The cohort included patients that were clinically classified as "ischemic" (I) showing evidence of coronary artery disease, "non-ischemic" (N) no evidence of coronary artery disease or "acute Myocardial infarction" (IM) myocardial infarction within 10 days of the implant. Tissue was processed and hybridized to the Affymetrix HG-U133A chip.
Submission date
Jan 07, 2004
Last update date
Oct 28, 2005
Contact name
Grindle M Suzanne
E-mail(s)
grind001@umn.edu Phone
612-624-2143
Organization name
Lillehei Heart Institute
Department
Division of Cardiology
Lab
Hall Cardiology
Street address
Dwan CVRC 289, MMC 508, 420 Delaware Street SE
City
Minneapolis
State/province
MN
ZIP/Postal code
55455
Country
USA
Platform ID
GPL96 Series (1)
GSE974 Left ventricular apex samples
Data table header descriptions ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
70
P
0.004998
AFFX-BioB-M_at
100.3
P
0.00141
AFFX-BioB-3_at
40.5
P
0.039661
AFFX-BioC-5_at
178.8
P
0.00039
AFFX-BioC-3_at
119.6
P
0.000147
AFFX-BioDn-5_at
171.1
P
0.000225
AFFX-BioDn-3_at
1161.5
P
0.000127
AFFX-CreX-5_at
1002.7
P
0.000044
AFFX-CreX-3_at
1599.8
P
0.000044
AFFX-DapX-5_at
7.7
A
0.227636
AFFX-DapX-M_at
12.2
A
0.262827
AFFX-DapX-3_at
2.3
A
0.699394
AFFX-LysX-5_at
1.4
A
0.60308
AFFX-LysX-M_at
2.5
A
0.699394
AFFX-LysX-3_at
10.9
A
0.205732
AFFX-PheX-5_at
2.1
A
0.772364
AFFX-PheX-M_at
1.8
A
0.9273
AFFX-PheX-3_at
5.4
A
0.645547
AFFX-ThrX-5_at
4.5
A
0.712257
AFFX-ThrX-M_at
13.6
A
0.300606
22283 577 Kbytes .Supplementary file Size Download File type/resource GSM14967.CEL.gz
3.3 Mb
(ftp) (http) CEL
Processed data included within Sample table
