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Status
Public on Jan 17, 2004
Title
N-3_PRE
Sample type
RNA
Source name
Left Cardiac Ventricle
Organism
Homo sapiens Extracted molecule
total RNA
Description
19 paired human left ventricular apex samples were harvested at the time of implant of a left ventricular assist device (PRE) and at the time of explant (POST). The cohort included patients that were clinically classified as "ischemic" (I) showing evidence of coronary artery disease, "non-ischemic" (N) no evidence of coronary artery disease or "acute Myocardial infarction" (IM) myocardial infarction within 10 days of the implant. Tissue was processed and hybridized to the Affymetrix HG-U133A chip.
Submission date
Jan 07, 2004
Last update date
Oct 28, 2005
Contact name
Grindle M Suzanne
E-mail(s)
grind001@umn.edu Phone
612-624-2143
Organization name
Lillehei Heart Institute
Department
Division of Cardiology
Lab
Hall Cardiology
Street address
Dwan CVRC 289, MMC 508, 420 Delaware Street SE
City
Minneapolis
State/province
MN
ZIP/Postal code
55455
Country
USA
Platform ID
GPL96 Series (1)
GSE974 Left ventricular apex samples
Data table header descriptions ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
89.1
P
0.002556
AFFX-BioB-M_at
222.8
P
0.00011
AFFX-BioB-3_at
62.3
P
0.000095
AFFX-BioC-5_at
309.7
P
0.000127
AFFX-BioC-3_at
231.6
P
0.00007
AFFX-BioDn-5_at
273.8
P
0.000052
AFFX-BioDn-3_at
1623.2
P
0.000081
AFFX-CreX-5_at
2369.4
P
0.000044
AFFX-CreX-3_at
3626.6
P
0.000044
AFFX-DapX-5_at
2.5
A
0.559354
AFFX-DapX-M_at
5.3
A
0.440646
AFFX-DapX-3_at
8.9
A
0.313723
AFFX-LysX-5_at
0.5
A
0.843268
AFFX-LysX-M_at
1.5
A
0.749204
AFFX-LysX-3_at
4.6
A
0.440646
AFFX-PheX-5_at
1
A
0.737173
AFFX-PheX-M_at
0.5
A
0.891021
AFFX-PheX-3_at
3.3
A
0.631562
AFFX-ThrX-5_at
1.5
A
0.772364
AFFX-ThrX-M_at
3.8
A
0.58862
22283 579 Kbytes .Supplementary file Size Download File type/resource GSM14962.CEL.gz
3.3 Mb
(ftp) (http) CEL
Processed data included within Sample table
