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Status
Public on Jan 17, 2004
Title
N-22_POST
Sample type
RNA
Source name
Left Cardiac Ventricle
Organism
Homo sapiens Extracted molecule
total RNA
Description
19 paired human left ventricular apex samples were harvested at the time of implant of a left ventricular assist device (PRE) and at the time of explant (POST). The cohort included patients that were clinically classified as "ischemic" (I) showing evidence of coronary artery disease, "non-ischemic" (N) no evidence of coronary artery disease or "acute Myocardial infarction" (IM) myocardial infarction within 10 days of the implant. Tissue was processed and hybridized to the Affymetrix HG-U133A chip.
Submission date
Jan 07, 2004
Last update date
Oct 28, 2005
Contact name
Grindle M Suzanne
E-mail(s)
grind001@umn.edu Phone
612-624-2143
Organization name
Lillehei Heart Institute
Department
Division of Cardiology
Lab
Hall Cardiology
Street address
Dwan CVRC 289, MMC 508, 420 Delaware Street SE
City
Minneapolis
State/province
MN
ZIP/Postal code
55455
Country
USA
Platform ID
GPL96 Series (1)
GSE974 Left ventricular apex samples
Data table header descriptions ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
102.8
P
0.036569
AFFX-BioB-M_at
172.9
P
0.010317
AFFX-BioB-3_at
88.8
P
0.026111
AFFX-BioC-5_at
279.4
P
0.000446
AFFX-BioC-3_at
185.2
P
0.001102
AFFX-BioDn-5_at
275.5
P
0.000297
AFFX-BioDn-3_at
1805.6
P
0.000446
AFFX-CreX-5_at
2522.3
P
0.000044
AFFX-CreX-3_at
4032.7
P
0.000044
AFFX-DapX-5_at
23.8
A
0.354453
AFFX-DapX-M_at
12
A
0.455413
AFFX-DapX-3_at
1.2
A
0.966323
AFFX-LysX-5_at
9.2
A
0.354453
AFFX-LysX-M_at
25.7
A
0.51489
AFFX-LysX-3_at
1.5
A
0.749204
AFFX-PheX-5_at
2.4
A
0.963431
AFFX-PheX-M_at
4.9
A
0.860518
AFFX-PheX-3_at
8.8
A
0.749204
AFFX-ThrX-5_at
4.2
A
0.834139
AFFX-ThrX-M_at
23.8
A
0.440646
22283 586 Kbytes .Supplementary file Size Download File type/resource GSM14959.CEL.gz
3.5 Mb
(ftp) (http) CEL
Processed data included within Sample table
