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Sample GSM14948 Query DataSets for GSM14948
Status Public on Jan 17, 2004
Title IM-3_PRE
Sample type RNA
Source name Left Cardiac Ventricle
Organism Homo sapiens
Extracted molecule total RNA
Description 19 paired human left ventricular apex samples were harvested at the time of implant of a left ventricular assist device (PRE) and at the time of explant (POST). The cohort included patients that were clinically classified as "ischemic" (I) showing evidence of coronary artery disease, "non-ischemic" (N) no evidence of coronary artery disease or "acute Myocardial  infarction" (IM) myocardial infarction within 10 days of the implant. Tissue was processed and hybridized to the Affymetrix HG-U133A chip.
Keywords = Heart, Cardiac, Assist Device, LVAD, GATA-4, Sprouty1, microarray, heart failure
Submission date Jan 07, 2004
Last update date Oct 28, 2005
Contact name Grindle M Suzanne
Phone 612-624-2143
Organization name Lillehei Heart Institute
Department Division of Cardiology
Lab Hall Cardiology
Street address Dwan CVRC 289, MMC 508, 420 Delaware Street SE
City Minneapolis
State/province MN
ZIP/Postal code 55455
Country USA
Platform ID GPL96
Series (1)
GSE974 Left ventricular apex samples

Data table header descriptions
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
AFFX-BioB-5_at 85.6 P 0.002867
AFFX-BioB-M_at 111.7 P 0.00034
AFFX-BioB-3_at 63.2 P 0.004017
AFFX-BioC-5_at 256.6 P 0.000225
AFFX-BioC-3_at 170.1 P 0.000169
AFFX-BioDn-5_at 171 P 0.000052
AFFX-BioDn-3_at 959.2 P 0.00007
AFFX-CreX-5_at 2072.7 P 0.000044
AFFX-CreX-3_at 2862.9 P 0.000044
AFFX-DapX-5_at 12.5 A 0.108979
AFFX-DapX-M_at 13.1 A 0.239063
AFFX-DapX-3_at 5.1 A 0.860518
AFFX-LysX-5_at 10.2 A 0.165861
AFFX-LysX-M_at 9.3 A 0.455413
AFFX-LysX-3_at 2.7 A 0.51489
AFFX-PheX-5_at 0.9 A 0.921998
AFFX-PheX-M_at 1.4 A 0.941556
AFFX-PheX-3_at 9.5 A 0.544587
AFFX-ThrX-5_at 8.1 A 0.686277
AFFX-ThrX-M_at 6.7 A 0.5

Total number of rows: 22283

Table truncated, full table size 576 Kbytes.

Supplementary file Size Download File type/resource
GSM14948.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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