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Sample GSM148824 Query DataSets for GSM148824
Status Public on Dec 07, 2007
Title adult head_AA22_experimentcnbwtemp
Sample type RNA
 
Source name adult head
Organism Drosophila melanogaster
Characteristics cn bw stock
Biomaterial provider Young Laboratory
Treatment protocol 25 C DD (after 12-hr 18 C/12-hr 25 C thermocycle in constant darkness)
Growth protocol initially 25 C DD, then 12-hr 18 C/12-hr 25 C thermocycle in constant darkness
Extracted molecule total RNA
Extraction protocol Flies were immediately frozen on dry ice. Approximately 100-200 heads were isolated on sieves after breaking the frozen flies
Label biotin
Label protocol Approximately 25 µg of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description none
Data processing Bioconductor Robust Multi-array Average
 
Submission date Dec 06, 2006
Last update date Dec 12, 2006
Contact name Herman Wijnen
E-mail(s) hw3a11@soton.ac.uk
Phone 02380594336
Organization name University of Southampton
Department Centre for Biological Sciences
Lab Wijnen
Street address Life Sciences Building 85 - Highfield Campus
City Southampton
State/province Hampshire
ZIP/Postal code SO17 1BJ
Country United Kingdom
 
Platform ID GPL72
Series (2)
GSE6492 AA1/AA2 time course of cn bw
GSE6542 Circadian time course

Data table header descriptions
ID_REF
NVALUE RMA calculated signal intensity normalized to the experimental average (set at 0)
VALUE RMA calculated signal intensity

Data table
ID_REF NVALUE VALUE
141200_at -0.016083333 4.187
141201_at -0.083916667 6.157
141202_at -0.01075 6.737
141203_at 0.111666667 6.017
141204_at -0.050166667 5.937
141205_at 0.04375 6.436
141206_at -0.034416667 8.032
141207_at 0.131416667 4.523
141208_at 0.146333333 7.709
141209_at 0.0425 7.836
141210_at -0.084666667 3.79
141211_at 0.176833333 5.849
141212_at 0.093833333 9.198
141213_at -0.01525 7.257
141214_at 0.025083333 8.591
141215_at -0.017916667 7.94
141216_at -0.067583333 7.33
141217_at 0.047583333 9.272
141218_at 0.139166667 6.648
141219_at 0.082666667 4.793

Total number of rows: 14010

Table truncated, full table size 368 Kbytes.




Supplementary file Size Download File type/resource
GSM148824.CEL.gz 2.6 Mb (ftp)(http) CEL

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