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Sample GSM139893 Query DataSets for GSM139893
Status Public on Feb 01, 2007
Title BM-MSC_rep3A
Sample type RNA
 
Source name human bone marrow-derived mesenchymal stem cell
Organism Homo sapiens
Characteristics Tissue: bone marrow-derived mesenchymal stem cell (Cambrex Lot#4F0312)
Biomaterial provider Dr Biagio Saitta, Coriell Institute for Medical Research, 403 Haddon Ave, Camden, NJ 08103, USA, bsaitta@coriell.org
http://www.coriell.org/
Coriell
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from cells in culture using the RNAeasy Mini Kit (Qiagen), according to manufacturer's protocol
Label Biotin
Label protocol Microarray target was prepared following the Affymetrix protocol. In brief, cDNA was synthesized from total RNA using the SuperScript II double-stranded cDNA synthesis kit (Invitrogen), followed by in vitro transcription, where labeled cRNA was generated (Enzo).
 
Hybridization protocol Hybridization was carried out according to Affymetrix protocol.
Description none
Data processing RMA method normalization implemented in BioConductor
 
Submission date Oct 12, 2006
Last update date Oct 13, 2006
Contact name Kenro Kusumi
E-mail(s) kenro@asu.edu
Phone 480-727-8993
Fax 480-965-6899
URL http://sols.asu.edu/faculty/kkusumi.php
Organization name Arizona State University
Department School of Life Sciences
Street address PO Box 874501
City Tempe
State/province AZ
ZIP/Postal code 85287
Country USA
 
Platform ID GPL96
Series (1)
GSE6029 Cord Blood-Derived Mesenchymal Stem Cells with Distinct Growth Kinetics, Differentiation Potentials, Expression Profiles

Data table header descriptions
ID_REF
VALUE RMA expression estimate

Data table
ID_REF VALUE
1007_s_at 8.22802131559589
1053_at 4.48272902776512
117_at 5.18996090365321
121_at 7.38910890721689
1255_g_at 2.55140739485345
1294_at 6.23021083376505
1316_at 4.58216837179804
1320_at 4.53486798869411
1405_i_at 2.8135006551005
1431_at 2.93368952927172
1438_at 5.72936852605145
1487_at 5.97606755969541
1494_f_at 5.15541330045832
1598_g_at 11.8819985716236
160020_at 8.52448938458888
1729_at 6.44376107165973
177_at 4.52751228546323
1773_at 5.79413892089107
179_at 8.21577051329392
1861_at 5.7246615547641

Total number of rows: 22283

Table truncated, full table size 605 Kbytes.




Supplementary file Size Download File type/resource
GSM139893.CEL.gz 3.2 Mb (ftp)(http) CEL

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