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Sample GSM139892 Query DataSets for GSM139892
Status Public on Feb 01, 2007
Title BM-MSC_rep2A
Sample type RNA
 
Source name human bone marrow-derived mesenchymal stem cell
Organism Homo sapiens
Characteristics Tissue: bone marrow-derived mesenchymal stem cell (Cambrex Lot#4F0312)
Biomaterial provider Dr Biagio Saitta, Coriell Institute for Medical Research, 403 Haddon Ave, Camden, NJ 08103, USA, bsaitta@coriell.org
http://www.coriell.org/
Coriell
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from cells in culture using the RNAeasy Mini Kit (Qiagen), according to manufacturer's protocol
Label Biotin
Label protocol Microarray target was prepared following the Affymetrix protocol. In brief, cDNA was synthesized from total RNA using the SuperScript II double-stranded cDNA synthesis kit (Invitrogen), followed by in vitro transcription, where labeled cRNA was generated (Enzo).
 
Hybridization protocol Hybridization was carried out according to Affymetrix protocol.
Description none
Data processing RMA method normalization implemented in BioConductor
 
Submission date Oct 12, 2006
Last update date Oct 13, 2006
Contact name Kenro Kusumi
E-mail(s) kenro@asu.edu
Phone 480-727-8993
Fax 480-965-6899
URL http://sols.asu.edu/faculty/kkusumi.php
Organization name Arizona State University
Department School of Life Sciences
Street address PO Box 874501
City Tempe
State/province AZ
ZIP/Postal code 85287
Country USA
 
Platform ID GPL96
Series (1)
GSE6029 Cord Blood-Derived Mesenchymal Stem Cells with Distinct Growth Kinetics, Differentiation Potentials, Expression Profiles

Data table header descriptions
ID_REF
VALUE RMA expression estimate

Data table
ID_REF VALUE
1007_s_at 8.34267110549537
1053_at 4.44245590603693
117_at 5.33540683219683
121_at 7.52326065439425
1255_g_at 2.6752561085688
1294_at 6.18498726559569
1316_at 4.71564985854016
1320_at 4.50248910807343
1405_i_at 2.81442882422614
1431_at 2.90169691918821
1438_at 5.97270483721466
1487_at 5.81084767900732
1494_f_at 5.18199025680749
1598_g_at 11.9116698981006
160020_at 8.37972839049222
1729_at 6.57039160592924
177_at 4.58939182610994
1773_at 5.94449306292796
179_at 8.27536134864012
1861_at 5.76250578261053

Total number of rows: 22283

Table truncated, full table size 605 Kbytes.




Supplementary file Size Download File type/resource
GSM139892.CEL.gz 3.2 Mb (ftp)(http) CEL

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