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GEO accession:
Sample GSM1378007
Query DataSets for GSM1378007
Status
Public on May 03, 2014
Title
DPSC 50mM 48hr_rep 2
Sample type
RNA
Source name
dental pulp stem cells
Organism
Homo sapiens
Characteristics
cell type: adult mesenchymal stem cells
Treatment protocol
Different concentrations (0, 1, 5, 10 and 20mM) were mixed with culture medium and the cells were exposed to EtOH for 24 or 48hrs
Growth protocol
Established human dental pulp stem cells were cultured in vitro
Extracted molecule
total RNA
Extraction protocol
Total RNA was extracted by using Qiagen Rneasy kit
Label
Biotin
Label protocol
Biotin
Hybridization protocol
Affymetrix protocol
Scan protocol
Affymetrix protocol
Description
EtOH treatment
Data processing
MAS5
Submission date
May 02, 2014
Last update date
May 03, 2014
Contact name
Yong Kim
E-mail(s)
thadyk@ucla.edu
Organization name
UCLA
Street address
10833 Le Conte Ave, 73-022 CHS
City
Los Angeles
State/province
CA
ZIP/Postal code
90095
Country
USA
Platform ID
GPL570
Series (1)
GSE57255
Effect of EtOH on transcriptome signatures in human dental pulp stem cells
Data table header descriptions
ID_REF
VALUE
MAS5
Detection
Detection p-value
Data table
ID_REF
VALUE
Detection
Detection p-value
1007_s_at
1279.598
P
0.001353854
1053_at
561.3342
P
0.001353854
117_at
49.33749
A
0.3979936
121_at
664.8338
P
0.007542912
1255_g_at
71.86065
A
0.138725
1294_at
732.9069
P
0.000321521
1316_at
221.1039
P
0.000465701
1320_at
79.35315
A
0.1759894
1405_i_at
1.339253
A
0.9793616
1431_at
107.903
P
0.002224355
1438_at
124.3223
P
0.01930353
1487_at
332.4038
P
0.03133569
1494_f_at
88.4781
P
0.04394127
1552256_a_at
304.3045
P
0.000732422
1552257_a_at
959.1127
P
0.0012207
1552258_at
100.5676
A
0.0952148
1552261_at
82.11993
A
0.2958984
1552263_at
301.6649
P
0.000244141
1552264_a_at
269.5344
P
0.0012207
1552266_at
21.15213
A
0.1662598
Total number of rows:
54675
Table truncated, full table size
1703 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM1378007_DPSC_50mM_48hr_2.CEL.gz
3.7 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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