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GEO accession:
Sample GSM1378006
Query DataSets for GSM1378006
Status
Public on May 03, 2014
Title
DPSC 50mM 48hr_rep 1
Sample type
RNA
Source name
dental pulp stem cells
Organism
Homo sapiens
Characteristics
cell type: adult mesenchymal stem cells
Treatment protocol
Different concentrations (0, 1, 5, 10 and 20mM) were mixed with culture medium and the cells were exposed to EtOH for 24 or 48hrs
Growth protocol
Established human dental pulp stem cells were cultured in vitro
Extracted molecule
total RNA
Extraction protocol
Total RNA was extracted by using Qiagen Rneasy kit
Label
Biotin
Label protocol
Biotin
Hybridization protocol
Affymetrix protocol
Scan protocol
Affymetrix protocol
Description
EtOH treatment
Data processing
MAS5
Submission date
May 02, 2014
Last update date
May 03, 2014
Contact name
Yong Kim
E-mail(s)
thadyk@ucla.edu
Organization name
UCLA
Street address
10833 Le Conte Ave, 73-022 CHS
City
Los Angeles
State/province
CA
ZIP/Postal code
90095
Country
USA
Platform ID
GPL570
Series (1)
GSE57255
Effect of EtOH on transcriptome signatures in human dental pulp stem cells
Data table header descriptions
ID_REF
VALUE
MAS5
Detection
Detection p-value
Data table
ID_REF
VALUE
Detection
Detection p-value
1007_s_at
1348.824
P
0.000959383
1053_at
432.5824
P
0.000467546
117_at
32.58837
A
0.378145
121_at
599.9586
P
0.008689182
1255_g_at
86.18265
A
0.1505271
1294_at
849.3975
P
0.000959383
1316_at
264.6098
P
0.001353854
1320_at
81.7711
A
0.3979769
1405_i_at
3.8296
A
0.9380249
1431_at
128.0393
P
0.001602293
1438_at
129.01
P
0.0439678
1487_at
428.1799
P
0.03131375
1494_f_at
91.317
M
0.05447043
1552256_a_at
417.3182
P
0.00195313
1552257_a_at
963.6143
P
0.00195313
1552258_at
179.7773
P
0.0302734
1552261_at
28.54682
A
0.533936
1552263_at
349.3948
P
0.00195313
1552264_a_at
321.0346
P
0.0012207
1552266_at
45.58115
A
0.111572
Total number of rows:
54675
Table truncated, full table size
1700 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM1378006_DPSC_50mM_48hr_1.CEL.gz
3.8 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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