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GEO accession:
Sample GSM1378005
Query DataSets for GSM1378005
Status
Public on May 03, 2014
Title
DPSC 20mM 48hr_rep 2
Sample type
RNA
Source name
dental pulp stem cells
Organism
Homo sapiens
Characteristics
cell type: adult mesenchymal stem cells
Treatment protocol
Different concentrations (0, 1, 5, 10 and 20mM) were mixed with culture medium and the cells were exposed to EtOH for 24 or 48hrs
Growth protocol
Established human dental pulp stem cells were cultured in vitro
Extracted molecule
total RNA
Extraction protocol
Total RNA was extracted by using Qiagen Rneasy kit
Label
Biotin
Label protocol
Biotin
Hybridization protocol
Affymetrix protocol
Scan protocol
Affymetrix protocol
Description
EtOH treatment
Data processing
MAS5
Submission date
May 02, 2014
Last update date
May 03, 2014
Contact name
Yong Kim
E-mail(s)
thadyk@ucla.edu
Organization name
UCLA
Street address
10833 Le Conte Ave, 73-022 CHS
City
Los Angeles
State/province
CA
ZIP/Postal code
90095
Country
USA
Platform ID
GPL570
Series (1)
GSE57255
Effect of EtOH on transcriptome signatures in human dental pulp stem cells
Data table header descriptions
ID_REF
VALUE
MAS5
Detection
Detection p-value
Data table
ID_REF
VALUE
Detection
Detection p-value
1007_s_at
944.0034
P
0.000467546
1053_at
530.6993
P
0.001891623
117_at
55.46404
A
0.1072243
121_at
630.5775
P
0.002227676
1255_g_at
71.99669
M
0.06041932
1294_at
930.5406
P
0.000804598
1316_at
154.3169
P
0.000388206
1320_at
107.6948
A
0.2345194
1405_i_at
4.771376
A
0.7648858
1431_at
83.15163
P
0.006524379
1438_at
156.5643
P
0.005642788
1487_at
392.2408
P
0.02785966
1494_f_at
92.7192
P
0.03516287
1552256_a_at
309.2787
P
0.000244141
1552257_a_at
977.002
P
0.00195313
1552258_at
138.8528
P
0.04443359
1552261_at
38.3245
A
0.432373
1552263_at
295.2062
P
0.000244141
1552264_a_at
258.2136
P
0.000244141
1552266_at
40.28657
P
0.04370117
Total number of rows:
54675
Table truncated, full table size
1706 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM1378005_DPSC_20mM_48hr_2.CEL.gz
3.6 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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