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GEO accession:
Sample GSM1378004
Query DataSets for GSM1378004
Status
Public on May 03, 2014
Title
DPSC 20mM 48hr_rep 1
Sample type
RNA
Source name
dental pulp stem cells
Organism
Homo sapiens
Characteristics
cell type: adult mesenchymal stem cells
Treatment protocol
Different concentrations (0, 1, 5, 10 and 20mM) were mixed with culture medium and the cells were exposed to EtOH for 24 or 48hrs
Growth protocol
Established human dental pulp stem cells were cultured in vitro
Extracted molecule
total RNA
Extraction protocol
Total RNA was extracted by using Qiagen Rneasy kit
Label
Biotin
Label protocol
Biotin
Hybridization protocol
Affymetrix protocol
Scan protocol
Affymetrix protocol
Description
EtOH treatment
Data processing
MAS5
Submission date
May 02, 2014
Last update date
May 03, 2014
Contact name
Yong Kim
E-mail(s)
thadyk@ucla.edu
Organization name
UCLA
Street address
10833 Le Conte Ave, 73-022 CHS
City
Los Angeles
State/province
CA
ZIP/Postal code
90095
Country
USA
Platform ID
GPL570
Series (1)
GSE57255
Effect of EtOH on transcriptome signatures in human dental pulp stem cells
Data table header descriptions
ID_REF
VALUE
MAS5
Detection
Detection p-value
Data table
ID_REF
VALUE
Detection
Detection p-value
1007_s_at
1367.282
P
0.000959383
1053_at
416.1882
P
0.000804598
117_at
65.66699
P
0.03511595
121_at
666.7672
P
0.009985438
1255_g_at
68.98743
P
0.03513941
1294_at
878.4503
P
0.001141097
1316_at
231.9465
P
0.001891623
1320_at
131.3972
A
0.2189833
1405_i_at
13.63019
A
0.801695
1431_at
108.8187
P
0.003062412
1438_at
158.0235
P
0.008689182
1487_at
354.7973
P
0.02471098
1494_f_at
87.39059
P
0.0439678
1552256_a_at
336.9864
P
0.000244141
1552257_a_at
874.6374
P
0.0012207
1552258_at
77.52949
A
0.171387
1552261_at
9.577947
A
0.5
1552263_at
499.1381
P
0.000244141
1552264_a_at
295.7894
P
0.000244141
1552266_at
47.46248
P
0.02905273
Total number of rows:
54675
Table truncated, full table size
1701 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM1378004_DPSC_20mM_48hr_1.CEL.gz
3.8 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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