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GEO accession:
Sample GSM1378002
Query DataSets for GSM1378002
Status
Public on May 03, 2014
Title
DPSC 10mM 48hr_rep 1
Sample type
RNA
Source name
dental pulp stem cells
Organism
Homo sapiens
Characteristics
cell type: adult mesenchymal stem cells
Treatment protocol
Different concentrations (0, 1, 5, 10 and 20mM) were mixed with culture medium and the cells were exposed to EtOH for 24 or 48hrs
Growth protocol
Established human dental pulp stem cells were cultured in vitro
Extracted molecule
total RNA
Extraction protocol
Total RNA was extracted by using Qiagen Rneasy kit
Label
Biotin
Label protocol
Biotin
Hybridization protocol
Affymetrix protocol
Scan protocol
Affymetrix protocol
Description
EtOH treatment
Data processing
MAS5
Submission date
May 02, 2014
Last update date
May 03, 2014
Contact name
Yong Kim
E-mail(s)
thadyk@ucla.edu
Organization name
UCLA
Street address
10833 Le Conte Ave, 73-022 CHS
City
Los Angeles
State/province
CA
ZIP/Postal code
90095
Country
USA
Platform ID
GPL570
Series (1)
GSE57255
Effect of EtOH on transcriptome signatures in human dental pulp stem cells
Data table header descriptions
ID_REF
VALUE
MAS5
Detection
Detection p-value
Data table
ID_REF
VALUE
Detection
Detection p-value
1007_s_at
1227.222
P
0.001353854
1053_at
570.5927
P
0.000804598
117_at
33.546
A
0.1627732
121_at
736.0577
P
0.007542912
1255_g_at
77.03306
P
0.01488183
1294_at
768.6976
P
0.000673102
1316_at
185.6425
P
0.001602293
1320_at
105.4113
A
0.4383609
1405_i_at
1.748829
A
0.9722636
1431_at
100.2582
P
0.008689182
1438_at
165.9422
P
0.04394127
1487_at
336.2825
P
0.03133569
1494_f_at
57.2136
A
0.1896475
1552256_a_at
298.7356
P
0.000244141
1552257_a_at
979.671
P
0.000732422
1552258_at
64.37222
A
0.303711
1552261_at
4.316345
A
0.466064
1552263_at
320.1957
P
0.0012207
1552264_a_at
365.4651
P
0.000732422
1552266_at
23.89769
A
0.4233398
Total number of rows:
54675
Table truncated, full table size
1705 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM1378002_DPSC_10mM_48hr_1.CEL.gz
3.6 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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