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GEO accession:
Sample GSM1378000
Query DataSets for GSM1378000
Status
Public on May 03, 2014
Title
DPSC 5mM 48hr_rep 1
Sample type
RNA
Source name
dental pulp stem cells
Organism
Homo sapiens
Characteristics
cell type: adult mesenchymal stem cells
Treatment protocol
Different concentrations (0, 1, 5, 10 and 20mM) were mixed with culture medium and the cells were exposed to EtOH for 24 or 48hrs
Growth protocol
Established human dental pulp stem cells were cultured in vitro
Extracted molecule
total RNA
Extraction protocol
Total RNA was extracted by using Qiagen Rneasy kit
Label
Biotin
Label protocol
Biotin
Hybridization protocol
Affymetrix protocol
Scan protocol
Affymetrix protocol
Description
EtOH treatment
Data processing
MAS5
Submission date
May 02, 2014
Last update date
May 03, 2014
Contact name
Yong Kim
E-mail(s)
thadyk@ucla.edu
Organization name
UCLA
Street address
10833 Le Conte Ave, 73-022 CHS
City
Los Angeles
State/province
CA
ZIP/Postal code
90095
Country
USA
Platform ID
GPL570
Series (1)
GSE57255
Effect of EtOH on transcriptome signatures in human dental pulp stem cells
Data table header descriptions
ID_REF
VALUE
MAS5
Detection
Detection p-value
Data table
ID_REF
VALUE
Detection
Detection p-value
1007_s_at
1327.954
P
0.002616955
1053_at
513.1568
P
0.001353854
117_at
4.376449
A
0.9510053
121_at
641.4413
P
0.007542912
1255_g_at
74.82913
A
0.1171214
1294_at
784.1944
P
0.000467546
1316_at
264.2203
P
0.000959383
1320_at
100.8434
A
0.1896873
1405_i_at
6.271549
A
0.8640853
1431_at
93.08516
P
0.002616955
1438_at
129.3425
P
0.02186644
1487_at
403.3836
P
0.02785966
1494_f_at
101.9793
M
0.06041932
1552256_a_at
256.1154
P
0.000244141
1552257_a_at
969.9415
P
0.00195313
1552258_at
55.30565
A
0.1237793
1552261_at
2.457073
A
0.665527
1552263_at
287.2494
P
0.000244141
1552264_a_at
288.8303
P
0.000732422
1552266_at
42.96648
M
0.0561523
Total number of rows:
54675
Table truncated, full table size
1703 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM1378000_DPSC_5mM_48hr_1.CEL.gz
3.6 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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