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GEO accession:
Sample GSM1377999
Query DataSets for GSM1377999
Status
Public on May 03, 2014
Title
DPSC 1mM 48hr_rep 2
Sample type
RNA
Source name
dental pulp stem cells
Organism
Homo sapiens
Characteristics
cell type: adult mesenchymal stem cells
Treatment protocol
Different concentrations (0, 1, 5, 10 and 20mM) were mixed with culture medium and the cells were exposed to EtOH for 24 or 48hrs
Growth protocol
Established human dental pulp stem cells were cultured in vitro
Extracted molecule
total RNA
Extraction protocol
Total RNA was extracted by using Qiagen Rneasy kit
Label
Biotin
Label protocol
Biotin
Hybridization protocol
Affymetrix protocol
Scan protocol
Affymetrix protocol
Description
EtOH treatment
Data processing
MAS5
Submission date
May 02, 2014
Last update date
May 03, 2014
Contact name
Yong Kim
E-mail(s)
thadyk@ucla.edu
Organization name
UCLA
Street address
10833 Le Conte Ave, 73-022 CHS
City
Los Angeles
State/province
CA
ZIP/Postal code
90095
Country
USA
Platform ID
GPL570
Series (1)
GSE57255
Effect of EtOH on transcriptome signatures in human dental pulp stem cells
Data table header descriptions
ID_REF
VALUE
MAS5
Detection
Detection p-value
Data table
ID_REF
VALUE
Detection
Detection p-value
1007_s_at
1214.081
P
0.001353854
1053_at
477.4355
P
0.001141097
117_at
31.01911
A
0.3208022
121_at
757.6456
P
0.003584867
1255_g_at
88.08619
P
0.005635972
1294_at
693.6941
P
0.000673102
1316_at
254.3373
P
0.000959383
1320_at
48.19655
A
0.3979602
1405_i_at
3.701077
A
0.7651048
1431_at
103.3055
P
0.000320848
1438_at
143.6662
P
0.01492288
1487_at
418.6303
P
0.02785966
1494_f_at
116.9724
P
0.03133569
1552256_a_at
316.8881
P
0.000244141
1552257_a_at
940.9064
P
0.000732422
1552258_at
135.484
A
0.19458
1552261_at
56.28426
A
0.398926
1552263_at
384.6447
P
0.000244141
1552264_a_at
411.2008
P
0.00195313
1552266_at
32.27834
A
0.07714844
Total number of rows:
54675
Table truncated, full table size
1704 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM1377999_DPSC_1mM_48hr_2.CEL.gz
3.7 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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