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GEO accession:
Sample GSM1377997
Query DataSets for GSM1377997
Status
Public on May 03, 2014
Title
DPSC No TX-48hr_rep 2
Sample type
RNA
Source name
dental pulp stem cells
Organism
Homo sapiens
Characteristics
cell type: adult mesenchymal stem cells
Treatment protocol
Different concentrations (0, 1, 5, 10 and 20mM) were mixed with culture medium and the cells were exposed to EtOH for 24 or 48hrs
Growth protocol
Established human dental pulp stem cells were cultured in vitro
Extracted molecule
total RNA
Extraction protocol
Total RNA was extracted by using Qiagen Rneasy kit
Label
Biotin
Label protocol
Biotin
Hybridization protocol
Affymetrix protocol
Scan protocol
Affymetrix protocol
Description
EtOH treatment
Data processing
MAS5
Submission date
May 02, 2014
Last update date
May 03, 2014
Contact name
Yong Kim
E-mail(s)
thadyk@ucla.edu
Organization name
UCLA
Street address
10833 Le Conte Ave, 73-022 CHS
City
Los Angeles
State/province
CA
ZIP/Postal code
90095
Country
USA
Platform ID
GPL570
Series (1)
GSE57255
Effect of EtOH on transcriptome signatures in human dental pulp stem cells
Data table header descriptions
ID_REF
VALUE
MAS5
Detection
Detection p-value
Data table
ID_REF
VALUE
Detection
Detection p-value
1007_s_at
948.4371
P
0.00113916
1053_at
448.4157
P
0.001141097
117_at
55.32324
A
0.4383609
121_at
612.6233
P
0.003584867
1255_g_at
64.45347
A
0.2345566
1294_at
855.2852
P
0.000804598
1316_at
249.5208
P
0.003062412
1320_at
78.31777
A
0.2345566
1405_i_at
37.31305
A
0.8348513
1431_at
70.3054
P
0.02471098
1438_at
162.472
M
0.06041932
1487_at
471.2946
P
0.03934041
1494_f_at
127.2113
P
0.01144739
1552256_a_at
286.6661
P
0.00415039
1552257_a_at
993.4577
P
0.00292969
1552258_at
75.46426
A
0.3266602
1552261_at
55.72152
A
0.303711
1552263_at
297.6593
P
0.000244141
1552264_a_at
358.4605
P
0.0012207
1552266_at
26.5153
A
0.27417
Total number of rows:
54675
Table truncated, full table size
1701 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM1377997_DPSC_NO_TX_48hr_2.CEL.gz
3.7 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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