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GEO accession:
Sample GSM1377996
Query DataSets for GSM1377996
Status
Public on May 03, 2014
Title
DPSC No TX-48hr_rep 1
Sample type
RNA
Source name
dental pulp stem cells
Organism
Homo sapiens
Characteristics
cell type: adult mesenchymal stem cells
Treatment protocol
Different concentrations (0, 1, 5, 10 and 20mM) were mixed with culture medium and the cells were exposed to EtOH for 24 or 48hrs
Growth protocol
Established human dental pulp stem cells were cultured in vitro
Extracted molecule
total RNA
Extraction protocol
Total RNA was extracted by using Qiagen Rneasy kit
Label
Biotin
Label protocol
Biotin
Hybridization protocol
Affymetrix protocol
Scan protocol
Affymetrix protocol
Description
EtOH treatment
Data processing
MAS5
Submission date
May 02, 2014
Last update date
May 03, 2014
Contact name
Yong Kim
E-mail(s)
thadyk@ucla.edu
Organization name
UCLA
Street address
10833 Le Conte Ave, 73-022 CHS
City
Los Angeles
State/province
CA
ZIP/Postal code
90095
Country
USA
Platform ID
GPL570
Series (1)
GSE57255
Effect of EtOH on transcriptome signatures in human dental pulp stem cells
Data table header descriptions
ID_REF
VALUE
MAS5
Detection
Detection p-value
Data table
ID_REF
VALUE
Detection
Detection p-value
1007_s_at
1159.606
P
0.001353854
1053_at
550.3079
P
0.001141097
117_at
9.596291
A
0.679449
121_at
568.9522
P
0.004862762
1255_g_at
95.70285
P
0.04394127
1294_at
1048.69
P
0.002616955
1316_at
268.186
P
0.003066685
1320_at
94.53754
A
0.3586904
1405_i_at
1.167076
A
0.990861
1431_at
95.24175
P
0.008670453
1438_at
108.984
M
0.06041932
1487_at
376.6107
P
0.03516287
1494_f_at
111.2006
A
0.1276453
1552256_a_at
405.2494
P
0.000244141
1552257_a_at
1098.654
P
0.00415039
1552258_at
81.75509
A
0.432373
1552261_at
9.347677
A
0.5
1552263_at
331.2222
P
0.000244141
1552264_a_at
334.7838
P
0.004150391
1552266_at
42.86045
A
0.171387
Total number of rows:
54675
Table truncated, full table size
1705 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM1377996_DPSC_NO_TX_48hr_1.CEL.gz
3.6 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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