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GEO accession:
Sample GSM1377991
Query DataSets for GSM1377991
Status
Public on May 03, 2014
Title
DPSC 10mM 24hr_rep 2
Sample type
RNA
Source name
dental pulp stem cells
Organism
Homo sapiens
Characteristics
cell type: adult mesenchymal stem cells
Treatment protocol
Different concentrations (0, 1, 5, 10 and 20mM) were mixed with culture medium and the cells were exposed to EtOH for 24 or 48hrs
Growth protocol
Established human dental pulp stem cells were cultured in vitro
Extracted molecule
total RNA
Extraction protocol
Total RNA was extracted by using Qiagen Rneasy kit
Label
Biotin
Label protocol
Biotin
Hybridization protocol
Affymetrix protocol
Scan protocol
Affymetrix protocol
Description
EtOH treatment
Data processing
MAS5
Submission date
May 02, 2014
Last update date
May 03, 2014
Contact name
Yong Kim
E-mail(s)
thadyk@ucla.edu
Organization name
UCLA
Street address
10833 Le Conte Ave, 73-022 CHS
City
Los Angeles
State/province
CA
ZIP/Postal code
90095
Country
USA
Platform ID
GPL570
Series (1)
GSE57255
Effect of EtOH on transcriptome signatures in human dental pulp stem cells
Data table header descriptions
ID_REF
VALUE
MAS5
Detection
Detection p-value
Data table
ID_REF
VALUE
Detection
Detection p-value
1007_s_at
1148.823
P
0.00056169
1053_at
465.7618
P
0.000467546
117_at
54.75168
A
0.2674626
121_at
693.3917
P
0.005642788
1255_g_at
76.56105
A
0.08133665
1294_at
684.5081
P
0.000804598
1316_at
192.3437
P
0.000388206
1320_at
146.6743
M
0.06041932
1405_i_at
1.291184
A
0.9722937
1431_at
82.1094
P
0.009985438
1438_at
127.5508
P
0.01700051
1487_at
344.5433
P
0.02471098
1494_f_at
105.1484
P
0.03516287
1552256_a_at
262.6667
P
0.000244141
1552257_a_at
800.7883
P
0.0012207
1552258_at
68.32816
A
0.27417
1552261_at
48.11437
A
0.390625
1552263_at
418.0875
P
0.000244141
1552264_a_at
582.884
P
0.00195313
1552266_at
41.80965
P
0.003662109
Total number of rows:
54675
Table truncated, full table size
1702 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM1377991_DPSC_10mM_24hr_2.CEL.gz
3.8 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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