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GEO accession:
Sample GSM1377990
Query DataSets for GSM1377990
Status
Public on May 03, 2014
Title
DPSC 10mM 24hr_rep 1
Sample type
RNA
Source name
dental pulp stem cells
Organism
Homo sapiens
Characteristics
cell type: adult mesenchymal stem cells
Treatment protocol
Different concentrations (0, 1, 5, 10 and 20mM) were mixed with culture medium and the cells were exposed to EtOH for 24 or 48hrs
Growth protocol
Established human dental pulp stem cells were cultured in vitro
Extracted molecule
total RNA
Extraction protocol
Total RNA was extracted by using Qiagen Rneasy kit
Label
Biotin
Label protocol
Biotin
Hybridization protocol
Affymetrix protocol
Scan protocol
Affymetrix protocol
Description
EtOH treatment
Data processing
MAS5
Submission date
May 02, 2014
Last update date
May 03, 2014
Contact name
Yong Kim
E-mail(s)
thadyk@ucla.edu
Organization name
UCLA
Street address
10833 Le Conte Ave, 73-022 CHS
City
Los Angeles
State/province
CA
ZIP/Postal code
90095
Country
USA
Platform ID
GPL570
Series (1)
GSE57255
Effect of EtOH on transcriptome signatures in human dental pulp stem cells
Data table header descriptions
ID_REF
VALUE
MAS5
Detection
Detection p-value
Data table
ID_REF
VALUE
Detection
Detection p-value
1007_s_at
1196.694
P
0.000959383
1053_at
593.2702
P
0.001141097
117_at
62.29416
A
0.1896873
121_at
624.3836
P
0.005642788
1255_g_at
54.01585
A
0.1896475
1294_at
607.9939
P
0.000467546
1316_at
164.1532
P
0.000671849
1320_at
124.041
A
0.08936871
1405_i_at
31.43469
A
0.4376456
1431_at
72.71944
P
0.003584867
1438_at
128.1701
P
0.03131375
1487_at
326.4456
P
0.0439678
1494_f_at
95.29169
A
0.1171214
1552256_a_at
363.6443
P
0.0012207
1552257_a_at
876.7204
P
0.00195313
1552258_at
99.29449
A
0.129639
1552261_at
7.283903
A
0.4575195
1552263_at
445.5908
P
0.000244141
1552264_a_at
329.3905
P
0.000244141
1552266_at
37.30098
M
0.06469727
Total number of rows:
54675
Table truncated, full table size
1698 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM1377990_DPSC_10mM_24hr_1.CEL.gz
3.9 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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