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GEO accession:
Sample GSM1377988
Query DataSets for GSM1377988
Status
Public on May 03, 2014
Title
DPSC 5mM 24hr_rep 1
Sample type
RNA
Source name
dental pulp stem cells
Organism
Homo sapiens
Characteristics
cell type: adult mesenchymal stem cells
Treatment protocol
Different concentrations (0, 1, 5, 10 and 20mM) were mixed with culture medium and the cells were exposed to EtOH for 24 or 48hrs
Growth protocol
Established human dental pulp stem cells were cultured in vitro
Extracted molecule
total RNA
Extraction protocol
Total RNA was extracted by using Qiagen Rneasy kit
Label
Biotin
Label protocol
Biotin
Hybridization protocol
Affymetrix protocol
Scan protocol
Affymetrix protocol
Description
EtOH treatment
Data processing
MAS5
Submission date
May 02, 2014
Last update date
May 03, 2014
Contact name
Yong Kim
E-mail(s)
thadyk@ucla.edu
Organization name
UCLA
Street address
10833 Le Conte Ave, 73-022 CHS
City
Los Angeles
State/province
CA
ZIP/Postal code
90095
Country
USA
Platform ID
GPL570
Series (1)
GSE57255
Effect of EtOH on transcriptome signatures in human dental pulp stem cells
Data table header descriptions
ID_REF
VALUE
MAS5
Detection
Detection p-value
Data table
ID_REF
VALUE
Detection
Detection p-value
1007_s_at
1345.78
P
0.001141097
1053_at
565.6172
P
0.00056169
117_at
58.87684
A
0.3395325
121_at
626.4996
P
0.004180327
1255_g_at
83.75272
P
0.03931542
1294_at
720.8066
P
0.00056169
1316_at
304.4885
P
0.000959383
1320_at
140.4089
A
0.1171605
1405_i_at
7.032267
A
0.8347917
1431_at
64.04358
P
0.02461599
1438_at
102.7633
P
0.0439678
1487_at
463.4595
P
0.02785966
1494_f_at
124.8459
P
0.02777785
1552256_a_at
278.9927
P
0.000732422
1552257_a_at
1006.25
P
0.0012207
1552258_at
132.8823
A
0.171387
1552261_at
32.00328
A
0.432373
1552263_at
342.8048
P
0.000244141
1552264_a_at
349.5967
P
0.000244141
1552266_at
58.5834
P
0.0461426
Total number of rows:
54675
Table truncated, full table size
1702 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM1377988_DPSC_5mM_24hr_1.CEL.gz
3.7 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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