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GEO accession:
Sample GSM1377985
Query DataSets for GSM1377985
Status
Public on May 03, 2014
Title
DPSC No TX-24hr_rep 2
Sample type
RNA
Source name
dental pulp stem cells
Organism
Homo sapiens
Characteristics
cell type: adult mesenchymal stem cells
Treatment protocol
Different concentrations (0, 1, 5, 10 and 20mM) were mixed with culture medium and the cells were exposed to EtOH for 24 or 48hrs
Growth protocol
Established human dental pulp stem cells were cultured in vitro
Extracted molecule
total RNA
Extraction protocol
Total RNA was extracted by using Qiagen Rneasy kit
Label
Biotin
Label protocol
Biotin
Hybridization protocol
Affymetrix protocol
Scan protocol
Affymetrix protocol
Description
EtOH treatment
Data processing
MAS5
Submission date
May 02, 2014
Last update date
May 03, 2014
Contact name
Yong Kim
E-mail(s)
thadyk@ucla.edu
Organization name
UCLA
Street address
10833 Le Conte Ave, 73-022 CHS
City
Los Angeles
State/province
CA
ZIP/Postal code
90095
Country
USA
Platform ID
GPL570
Series (1)
GSE57255
Effect of EtOH on transcriptome signatures in human dental pulp stem cells
Data table header descriptions
ID_REF
VALUE
MAS5
Detection
Detection p-value
Data table
ID_REF
VALUE
Detection
Detection p-value
1007_s_at
1546.447
P
0.000673102
1053_at
657.6356
P
0.001141097
117_at
40.67742
A
0.2674626
121_at
615.3682
P
0.004180327
1255_g_at
93.12935
P
0.02469198
1294_at
885.3815
P
0.001141097
1316_at
267.6826
P
0.000671849
1320_at
147.4588
A
0.1387651
1405_i_at
30.07954
A
0.8773696
1431_at
70.74516
P
0.000673102
1438_at
137.4927
P
0.02785966
1487_at
473.9413
P
0.02471098
1494_f_at
87.68481
A
0.162935
1552256_a_at
356.6512
P
0.00195313
1552257_a_at
1038.661
P
0.00195313
1552258_at
81.10633
A
0.303711
1552261_at
40.69809
A
0.3579102
1552263_at
398.9821
P
0.000244141
1552264_a_at
301.364
P
0.000244141
1552266_at
40.68989
A
0.07714844
Total number of rows:
54675
Table truncated, full table size
1699 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM1377985_DPSC_NO_TX_24hr_2.CEL.gz
3.8 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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