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Sample GSM136418 Query DataSets for GSM136418
Status Public on Sep 30, 2007
Title LCM tumor epithelium sample from patient #30
Sample type RNA
Source name human breast cancer tumor epithelium
Organism Homo sapiens
Characteristics diagnosis: non-IBC
status: Deceased
patient_id: 30
race: African American
tnm_stage: IIB
er_status: NEG
tissue: Tumor
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: No, ER: NEG, Her2Neu: NEG, Stage: IIB, Cyclin E: POS
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Reanalyzed by GSE47561

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 10.75761742
1053_at 5.527383778
117_at 6.42639947
121_at 8.403583907
1255_g_at 4.353376259
1294_at 7.696309637
1316_at 6.63447288
1320_at 4.755427959
1405_i_at 7.484094484
1431_at 4.279676294
1438_at 6.773171772
1487_at 7.508005641
1494_f_at 6.656828691
1598_g_at 10.35246469
160020_at 7.946740727
1729_at 8.503883217
1773_at 5.205786702
177_at 5.563167927
179_at 8.678077616
1861_at 5.420431451

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136418.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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