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Sample GSM136384 Query DataSets for GSM136384
Status Public on Sep 30, 2007
Title LCM tumor epithelium sample from patient #48
Sample type RNA
Source name human breast cancer tumor epithelium
Organism Homo sapiens
Characteristics diagnosis: IBC
status: Deceased
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: U, ER: NEG, Her2Neu: U, Stage: IIIA, Clinical IBC: Yes
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Reanalyzed by GSE47561

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 10.31958207
1053_at 5.873394812
117_at 6.578384032
121_at 8.209484868
1255_g_at 4.198781537
1294_at 9.057946574
1316_at 6.610660003
1320_at 5.09797068
1405_i_at 7.750378511
1431_at 4.163755487
1438_at 6.957799236
1487_at 7.349471616
1494_f_at 6.6600298
1598_g_at 10.01500091
160020_at 7.760518544
1729_at 8.075979731
1773_at 5.30745527
177_at 5.073473471
179_at 8.759661822
1861_at 5.802738665

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136384.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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