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Sample GSM136382 Query DataSets for GSM136382
Status Public on Sep 30, 2007
Title LCM tumor epithelium sample from patient #46
Sample type RNA
Source name human breast cancer tumor epithelium
Organism Homo sapiens
Characteristics diagnosis: IBC
status: Alive
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: Yes, ER: POS, Her2Neu: NEG, Stage: IIIA, Clinical IBC: No
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Reanalyzed by GSE47561

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 10.7141886
1053_at 5.567230959
117_at 6.210419982
121_at 8.32521829
1255_g_at 4.255365774
1294_at 7.426742267
1316_at 6.71756938
1320_at 5.19380991
1405_i_at 6.60471179
1431_at 4.308110581
1438_at 7.149400588
1487_at 7.196744063
1494_f_at 6.960340078
1598_g_at 9.976793379
160020_at 7.849736643
1729_at 7.956185516
1773_at 5.189797807
177_at 5.227981399
179_at 8.72777973
1861_at 5.427441218

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136382.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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