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Sample GSM136378 Query DataSets for GSM136378
Status Public on Sep 30, 2007
Title LCM tumor epithelium sample from patient #42
Sample type RNA
Source name human breast cancer tumor epithelium
Organism Homo sapiens
Characteristics diagnosis: IBC
status: Alive
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: Yes, ER: POS, Her2Neu: NEG, Stage: IIIB, Clinical IBC: Yes
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Reanalyzed by GSE47561

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 9.533505422
1053_at 5.776217869
117_at 6.819697285
121_at 8.435684903
1255_g_at 4.301376913
1294_at 7.92129315
1316_at 6.516507053
1320_at 4.921093391
1405_i_at 7.544554526
1431_at 4.144981328
1438_at 6.688671021
1487_at 7.439469855
1494_f_at 6.703990957
1598_g_at 9.767654536
160020_at 7.987303339
1729_at 8.286505241
1773_at 5.383027566
177_at 5.45138136
179_at 8.665328175
1861_at 5.211409019

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136378.CEL.gz 3.3 Mb (ftp)(http) CEL
Processed data included within Sample table

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