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Sample GSM136377 Query DataSets for GSM136377
Status Public on Sep 30, 2007
Title LCM tumor epithelium sample from patient #41
Sample type RNA
Source name human breast cancer tumor epithelium
Organism Homo sapiens
Characteristics diagnosis: IBC
status: Deceased
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: Yes, ER: NEG, Her2Neu: NEG, Stage: IIIB, Clinical IBC: No
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Reanalyzed by GSE47561

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 10.42709125
1053_at 5.416924592
117_at 6.678167378
121_at 8.621651919
1255_g_at 4.388888424
1294_at 7.654712618
1316_at 6.753984024
1320_at 5.122102565
1405_i_at 7.41638012
1431_at 4.287854227
1438_at 7.180520091
1487_at 7.586429252
1494_f_at 7.014636691
1598_g_at 9.626618553
160020_at 8.198794775
1729_at 8.092598543
1773_at 5.488928179
177_at 5.375698768
179_at 8.921044974
1861_at 5.192813005

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136377.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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