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Sample GSM136370 Query DataSets for GSM136370
Status Public on Sep 30, 2007
Title LCM stroma sample from patient #30
Sample type RNA
Source name human breast cancer stroma
Organism Homo sapiens
Characteristics diagnosis: non-IBC
status: Deceased
patient_id: 30
race: African American
tnm_stage: IIB
er_status: NEG
tissue: Stroma
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: No, ER: NEG, Her2Neu: NEG, Stage: IIB
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Reanalyzed by GSE47561

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 9.984446015
1053_at 4.974187077
117_at 5.935077818
121_at 7.77368012
1255_g_at 4.200911518
1294_at 8.172602524
1316_at 6.930831721
1320_at 4.332785053
1405_i_at 6.671380772
1431_at 3.828509103
1438_at 6.660061001
1487_at 7.066929456
1494_f_at 6.371063572
1598_g_at 10.24540784
160020_at 7.518579665
1729_at 8.489413578
1773_at 5.009857293
177_at 5.864554321
179_at 8.538494808
1861_at 5.889515589

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136370.CEL.gz 3.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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