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Sample GSM136367 Query DataSets for GSM136367
Status Public on Sep 30, 2007
Title LCM stroma sample from patient #34
Sample type RNA
Source name human breast cancer stroma
Organism Homo sapiens
Characteristics diagnosis: non-IBC
status: Deceased
patient_id: 34
race: African American
tnm_stage: IIIA
er_status: NEG
tissue: Stroma
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: Yes, ER: NEG, Her2Neu: U, Stage: IIIA
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Reanalyzed by GSE47561

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 9.351453673
1053_at 4.728828181
117_at 6.552401731
121_at 7.977295123
1255_g_at 4.050116798
1294_at 8.573933985
1316_at 6.880532149
1320_at 4.686122139
1405_i_at 6.178430776
1431_at 4.061333273
1438_at 6.578294089
1487_at 6.939601628
1494_f_at 6.453751047
1598_g_at 11.35813613
160020_at 7.740543473
1729_at 8.085824196
1773_at 4.974873498
177_at 5.199368908
179_at 8.411593774
1861_at 5.7967125

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136367.CEL.gz 3.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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