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Sample GSM136366 Query DataSets for GSM136366
Status Public on Sep 30, 2007
Title LCM stroma sample from patient #27
Sample type RNA
Source name human breast cancer stroma
Organism Homo sapiens
Characteristics diagnosis: non-IBC
status: Deceased
patient_id: 27
race: African American
tnm_stage: IIB
er_status: POS
tissue: Stroma
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: No, ER: POS, Her2Neu: NEG, Stage: IIB
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Reanalyzed by GSE47561

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 9.693770915
1053_at 4.967545603
117_at 6.061601856
121_at 7.97574027
1255_g_at 3.992695025
1294_at 7.788598797
1316_at 6.340504345
1320_at 4.623079808
1405_i_at 7.244167489
1431_at 3.861161585
1438_at 6.551066347
1487_at 6.98560326
1494_f_at 6.593900558
1598_g_at 9.962147804
160020_at 7.575737241
1729_at 8.128344302
1773_at 4.886787811
177_at 5.020744473
179_at 8.33416603
1861_at 5.099770401

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136366.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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