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Sample GSM136364 Query DataSets for GSM136364
Status Public on Sep 30, 2007
Title LCM stroma sample from patient #25
Sample type RNA
Source name human breast cancer stroma
Organism Homo sapiens
Characteristics diagnosis: non-IBC
status: Deceased
patient_id: 25
race: European American
tnm_stage: IIB
er_status: NEG
tissue: Stroma
Extracted molecule total RNA
Extraction protocol PicoPure kit (Arcturus)
Label biotin
Label protocol Small Sample Labeling Protocol vII from Affymetrix
Hybridization protocol Standard Affy protocol
Scan protocol Standard Affy protocol
Description Chemo: No, ER: NEG, Her2Neu: NEG, Stage: IIB
Data processing RMA
Submission date Sep 15, 2006
Last update date Feb 17, 2016
Contact name Stefan Ambs
Organization name NCI
Street address 37 Convent Dr Bldg 37 Room 3050
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
Platform ID GPL96
Series (1)
GSE5847 Tumor and stroma from breast by LCM
Reanalyzed by GSE47561

Data table header descriptions
VALUE RMA log 2 expression levels

Data table
1007_s_at 9.090772896
1053_at 4.870789588
117_at 6.33574012
121_at 8.063297307
1255_g_at 4.149496152
1294_at 7.853658756
1316_at 6.853865501
1320_at 4.544946018
1405_i_at 5.809419257
1431_at 3.991503828
1438_at 6.746990616
1487_at 7.059240279
1494_f_at 6.689961529
1598_g_at 10.57127914
160020_at 7.798906278
1729_at 8.095806985
1773_at 5.005489363
177_at 5.343619668
179_at 8.411351151
1861_at 5.228283621

Total number of rows: 22283

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM136364.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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