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Sample GSM130328 Query DataSets for GSM130328
Status Public on Sep 08, 2006
Title MAQC_GEX_1_A1
Sample type RNA
 
Source name MAQC sample A, i.e., Stratagene Universal Human Reference RNA (UHRR, Catalog #740000)
Organism Homo sapiens
Characteristics MAQC sample

Extracted molecule total RNA
Label Caliper
Label protocol Standardized RT (StaRT)-PCR (TM) is a quantitative competitive template PCR platform that provides numerical quantification of transcript abundance values at endpoint of PCR over the full range observed in human tissues (more than six orders of magnitude). Following reverse transcription, cDNA molecules representing each gene are measured in relation to a known number of its respective internal standard cDNA molecules.
 
Description NA
Data processing The data values are the number of molecules normalized to 1,000,000 ACTB molecules.
 
Submission date Aug 23, 2006
Last update date Sep 01, 2006
Contact name Leming Shi
E-mail(s) lemingshi@fudan.edu.cn
Phone +86-18616827008
Organization name Fudan University
Department School of Life Sciences
Lab Center for Pharmacogenomics
Street address 2005 Songhu Road
City Shanghai
ZIP/Postal code 200438
Country China
 
Platform ID GPL4198
Series (1)
GSE5350 MicroArray Quality Control (MAQC) Project

Data table header descriptions
ID_REF Manufacturer's 'AssayID'
VALUE The data values are the number of molecules normalized to 1,000,000 ACTB molecules.
Flag_Detection No threshold was set; every gene was identified as Present ("0").

Data table
ID_REF VALUE Flag_Detection
ACTB 1000000 0
GAPD 1058085.155 0
ABCB7 8119.14667 0
ABCC1 9099.72 0
ABCC5 2170.41333 0
ABCD2 112.12 0
ABCG1 2615.46667 0
ACHE 113.02667 0
ADAM9 21759.53333 0
ADM 26634.62667 0
ADORA2B 3169.37333 0
AES 471787.9067 0
AGT 49731.93333 0
ALOX5 210.85333 0
AMBP 44862.64 0
ANXA1 460102.3867 0
ANXA4 4048.97333 0
ANXA5 118682.92 0
APOF 633.88 0
AQP3 7022.64 0

Total number of rows: 207

Table truncated, full table size 3 Kbytes.




Supplementary data files not provided

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