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Sample GSM124842 Query DataSets for GSM124842
Status Public on Jun 25, 2008
Title Non-tolerant PBMCs_NoTOL_VHC_21
Sample type RNA
 
Source name Peripheral blood mononuclear cells
Organism Homo sapiens
Characteristics Peripheral blood mononuclear cells obtained from non-tolerant liver transplant recipient with hepatitis C infection and under treatment with cyclosporine A.
Biomaterial provider Giuseppe Tisone, University TOR VERGATA, Rome
Treatment protocol Ficoll isolation from peripheral blood
Growth protocol NA
Extracted molecule total RNA
Extraction protocol Tryzol extraction
Label streptavidin-PE
Label protocol Standrad Affymetrix protocol
 
Hybridization protocol Standrad Affymetrix protocol
Scan protocol Standrad Affymetrix protocol
Description see M.Martinez-LLordella et al. Am J Transplant
Data processing MAS 5
 
Submission date Aug 03, 2006
Last update date Aug 28, 2018
Contact name Alberto Sanchez-Fueyo
E-mail(s) afueyo@clinic.ub.es
Organization name Hospital Clinic Barcelona / IDIBAPS
Department Liver Transplantation Unit
Lab Transplantation Immunology
Street address Villarroel 170
City Barcelona
ZIP/Postal code 08036
Country Spain
 
Platform ID GPL570
Series (1)
GSE11881 Multiparameter Immune Profiling of Operational Tolerance in Liver Transplantation
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE MAS 5 signal
ABS_CALL detection (present/absent)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 114.3 P 0.00011
AFFX-BioB-M_at 191.3 P 0.000044
AFFX-BioB-3_at 124.7 P 0.000044
AFFX-BioC-5_at 348.3 P 0.000044
AFFX-BioC-3_at 424.3 P 0.000044
AFFX-BioDn-5_at 793.9 P 0.000044
AFFX-BioDn-3_at 1355.7 P 0.000044
AFFX-CreX-5_at 3816.5 P 0.000052
AFFX-CreX-3_at 4817.2 P 0.000044
AFFX-DapX-5_at 2 A 0.470241
AFFX-DapX-M_at 0.6 A 0.9273
AFFX-DapX-3_at 3.9 A 0.645559
AFFX-LysX-5_at 3.8 P 0.039648
AFFX-LysX-M_at 0.7 A 0.941572
AFFX-LysX-3_at 3.5 A 0.411373
AFFX-PheX-5_at 0.4 A 0.904352
AFFX-PheX-M_at 0.3 A 0.969035
AFFX-PheX-3_at 6.5 A 0.340661
AFFX-ThrX-5_at 1.7 A 0.760937
AFFX-ThrX-M_at 2.1 A 0.425962

Total number of rows: 54675

Table truncated, full table size 1396 Kbytes.




Supplementary file Size Download File type/resource
GSM124842.CEL.gz 7.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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