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Sample GSM124840 Query DataSets for GSM124840
Status Public on Jun 25, 2008
Title Non-tolerant PBMCs_NoTOL_VHC_20
Sample type RNA
 
Source name Peripheral blood mononuclear cells
Organism Homo sapiens
Characteristics Peripheral blood mononuclear cells obtained from non-tolerant liver transplant recipient with hepatitis C infection and under treatment with tacrolimus.
Biomaterial provider Giuseppe Tisone, University TOR VERGATA, Rome
Treatment protocol Ficoll isolation from peripheral blood
Growth protocol NA
Extracted molecule total RNA
Extraction protocol Tryzol extraction
Label streptavidin-PE
Label protocol Standrad Affymetrix protocol
 
Hybridization protocol Standrad Affymetrix protocol
Scan protocol Standrad Affymetrix protocol
Description see M.Martinez-LLordella et al. Am J Transplant
Data processing MAS 5
 
Submission date Aug 03, 2006
Last update date Aug 28, 2018
Contact name Alberto Sanchez-Fueyo
E-mail(s) afueyo@clinic.ub.es
Organization name Hospital Clinic Barcelona / IDIBAPS
Department Liver Transplantation Unit
Lab Transplantation Immunology
Street address Villarroel 170
City Barcelona
ZIP/Postal code 08036
Country Spain
 
Platform ID GPL570
Series (1)
GSE11881 Multiparameter Immune Profiling of Operational Tolerance in Liver Transplantation
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE MAS 5 signal
ABS_CALL Detection (present/absent)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 106.8 P 0.000195
AFFX-BioB-M_at 167.1 P 0.000044
AFFX-BioB-3_at 93.9 P 0.000044
AFFX-BioC-5_at 361.9 P 0.000052
AFFX-BioC-3_at 485.8 P 0.000044
AFFX-BioDn-5_at 781 P 0.000044
AFFX-BioDn-3_at 1614.2 P 0.00006
AFFX-CreX-5_at 4199.8 P 0.000052
AFFX-CreX-3_at 5077.7 P 0.000044
AFFX-DapX-5_at 5.2 M 0.058444
AFFX-DapX-M_at 5.6 A 0.354453
AFFX-DapX-3_at 1.5 A 0.860518
AFFX-LysX-5_at 3.1 A 0.16584
AFFX-LysX-M_at 1.2 A 0.814869
AFFX-LysX-3_at 3.5 A 0.250796
AFFX-PheX-5_at 3.6 A 0.48511
AFFX-PheX-M_at 0.5 A 0.973889
AFFX-PheX-3_at 7.1 A 0.275146
AFFX-ThrX-5_at 0.6 A 0.990668
AFFX-ThrX-M_at 4.9 A 0.15671

Total number of rows: 54675

Table truncated, full table size 1399 Kbytes.




Supplementary file Size Download File type/resource
GSM124840.CEL.gz 7.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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