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Sample GSM124838 Query DataSets for GSM124838
Status Public on Jun 25, 2008
Title Non-tolerant PBMCs_NoTOL_VHC_19
Sample type RNA
 
Source name Peripheral blood mononuclear cells
Organism Homo sapiens
Characteristics Peripheral blood mononuclear cells obtained from non-tolerant liver transplant recipient, with hepatitis C infection and under treatment with cyclosporine A.
Biomaterial provider Giuseppe Tisone, University TOR VERGATA, Rome
Treatment protocol Ficoll isolation from peripheral blood
Growth protocol NA
Extracted molecule total RNA
Extraction protocol Tryzol extraction
Label streptavidin-PE
Label protocol Standrad Affymetrix protocol
 
Hybridization protocol Standrad Affymetrix protocol
Scan protocol Standrad Affymetrix protocol
Description see M.Martinez-LLordella et al. Am J Transplant
Data processing MAS 5
 
Submission date Aug 03, 2006
Last update date Aug 28, 2018
Contact name Alberto Sanchez-Fueyo
E-mail(s) afueyo@clinic.ub.es
Organization name Hospital Clinic Barcelona / IDIBAPS
Department Liver Transplantation Unit
Lab Transplantation Immunology
Street address Villarroel 170
City Barcelona
ZIP/Postal code 08036
Country Spain
 
Platform ID GPL570
Series (1)
GSE11881 Multiparameter Immune Profiling of Operational Tolerance in Liver Transplantation
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE MAS 5 signal
ABS_CALL detection (present/absent)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 110.9 P 0.000258
AFFX-BioB-M_at 176.4 P 0.000044
AFFX-BioB-3_at 113 P 0.000052
AFFX-BioC-5_at 414.8 P 0.000044
AFFX-BioC-3_at 501.2 P 0.000044
AFFX-BioDn-5_at 828.4 P 0.000044
AFFX-BioDn-3_at 1622 P 0.000052
AFFX-CreX-5_at 4255.1 P 0.000052
AFFX-CreX-3_at 5056 P 0.000044
AFFX-DapX-5_at 1.1 A 0.514895
AFFX-DapX-M_at 4.7 A 0.574038
AFFX-DapX-3_at 0.7 A 0.941572
AFFX-LysX-5_at 3.1 A 0.354428
AFFX-LysX-M_at 0.8 A 0.824672
AFFX-LysX-3_at 3.5 A 0.485107
AFFX-PheX-5_at 0.6 A 0.979978
AFFX-PheX-M_at 0.3 A 0.990668
AFFX-PheX-3_at 2 A 0.617401
AFFX-ThrX-5_at 1 A 0.783496
AFFX-ThrX-M_at 0.4 A 0.876428

Total number of rows: 54675

Table truncated, full table size 1399 Kbytes.




Supplementary file Size Download File type/resource
GSM124838.CEL.gz 7.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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