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Sample GSM124833 Query DataSets for GSM124833
Status Public on Jun 25, 2008
Title Non-tolerant PBMCs_NoTOL_16
Sample type RNA
 
Source name Peripheral blood mononuclear cells
Organism Homo sapiens
Characteristics Peripheral blood mononuclear cells obtained from non-tolerant liver transplant recipient, hepatitis C virus negative, under treatment with tacrolimus.
Biomaterial provider Antoni Rimola, Hospital Clinic, Barcelona
Treatment protocol Ficoll isolation from peripheral blood
Growth protocol NA
Extracted molecule total RNA
Extraction protocol Tryzol extraction
Label streptavidin-PE
Label protocol Standrad Affymetrix protocol
 
Hybridization protocol Standrad Affymetrix protocol
Scan protocol Standrad Affymetrix protocol
Description see M.Martinez-LLordella et al. Am J Transplant
Data processing MAS 5
 
Submission date Aug 03, 2006
Last update date Aug 28, 2018
Contact name Alberto Sanchez-Fueyo
E-mail(s) afueyo@clinic.ub.es
Organization name Hospital Clinic Barcelona / IDIBAPS
Department Liver Transplantation Unit
Lab Transplantation Immunology
Street address Villarroel 170
City Barcelona
ZIP/Postal code 08036
Country Spain
 
Platform ID GPL570
Series (1)
GSE11881 Multiparameter Immune Profiling of Operational Tolerance in Liver Transplantation
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE MAS 5 signal
ABS_CALL detection (present/absent)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 123.6 P 0.000169
AFFX-BioB-M_at 196.3 P 0.000044
AFFX-BioB-3_at 117.3 P 0.000044
AFFX-BioC-5_at 398.6 P 0.000044
AFFX-BioC-3_at 486.3 P 0.000044
AFFX-BioDn-5_at 826.8 P 0.000044
AFFX-BioDn-3_at 1626.3 P 0.000052
AFFX-CreX-5_at 4387.8 P 0.000044
AFFX-CreX-3_at 5572.8 P 0.000044
AFFX-DapX-5_at 2.9 A 0.41138
AFFX-DapX-M_at 6.8 A 0.41138
AFFX-DapX-3_at 2.3 A 0.712257
AFFX-LysX-5_at 3.2 A 0.52976
AFFX-LysX-M_at 0.6 A 0.98333
AFFX-LysX-3_at 1.4 A 0.58865
AFFX-PheX-5_at 0.4 A 0.963431
AFFX-PheX-M_at 3.8 A 0.686277
AFFX-PheX-3_at 7.5 A 0.39692
AFFX-ThrX-5_at 0.3 A 0.960339
AFFX-ThrX-M_at 1 A 0.559364

Total number of rows: 54675

Table truncated, full table size 1400 Kbytes.




Supplementary file Size Download File type/resource
GSM124833.CEL.gz 7.7 Mb (ftp)(http) CEL
Processed data included within Sample table

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