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Sample GSM124748 Query DataSets for GSM124748
Status Public on Jun 25, 2008
Title Non-tolerant PBMCs_NoTOL_VHC_10
Sample type RNA
 
Source name Peripheral blood mononuclear cells
Organism Homo sapiens
Characteristics Peripheral blood mononuclear cells from a non-tolerant human liver transplant recipient with hepatitis C virus infection and under treatment with cyclosporine A.
Biomaterial provider Giuseppe Tisone, University TOR VERGATA, Rome
Treatment protocol Ficoll PBMC isolation from peripheral blood
Growth protocol NA
Extracted molecule total RNA
Extraction protocol Tryzol extraction
Label biotin
Label protocol Standard Affymetrix protocol
 
Hybridization protocol Standard Affymetrix protocol
Scan protocol Standard Affymetrix protocol
Description see M.Martinez-Llordella et al. Am J Transplant
Data processing MAS 5
 
Submission date Aug 02, 2006
Last update date Aug 28, 2018
Contact name Alberto Sanchez-Fueyo
E-mail(s) afueyo@clinic.ub.es
Organization name Hospital Clinic Barcelona / IDIBAPS
Department Liver Transplantation Unit
Lab Transplantation Immunology
Street address Villarroel 170
City Barcelona
ZIP/Postal code 08036
Country Spain
 
Platform ID GPL570
Series (1)
GSE11881 Multiparameter Immune Profiling of Operational Tolerance in Liver Transplantation
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE MAS 5 signal
ABS_CALL Detection (absent/present)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 152.6 P 0.000147
AFFX-BioB-M_at 195 P 0.000044
AFFX-BioB-3_at 149.3 P 0.000044
AFFX-BioC-5_at 438.7 P 0.000044
AFFX-BioC-3_at 521.9 P 0.000044
AFFX-BioDn-5_at 967.5 P 0.000044
AFFX-BioDn-3_at 1755.6 P 0.000044
AFFX-CreX-5_at 4482.5 P 0.000052
AFFX-CreX-3_at 5463.1 P 0.000044
AFFX-DapX-5_at 2 A 0.470241
AFFX-DapX-M_at 1 A 0.631562
AFFX-DapX-3_at 1.5 A 0.945787
AFFX-LysX-5_at 0.5 A 0.953533
AFFX-LysX-M_at 0.7 A 0.824672
AFFX-LysX-3_at 4.8 A 0.08944
AFFX-PheX-5_at 0.9 A 0.645547
AFFX-PheX-M_at 0.3 A 0.973889
AFFX-PheX-3_at 6.8 A 0.354453
AFFX-ThrX-5_at 1.2 A 0.645547
AFFX-ThrX-M_at 2.7 A 0.287743

Total number of rows: 54675

Table truncated, full table size 1399 Kbytes.




Supplementary file Size Download File type/resource
GSM124748.CEL.gz 7.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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