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Sample GSM124675 Query DataSets for GSM124675
Status Public on Jun 25, 2008
Title Non-tolerant PBMCs_NoTOL_VHC_9
Sample type RNA
 
Source name Peripheral blood mononuclear cells
Organism Homo sapiens
Characteristics Peripheral blood mononuclear cells obtained from non-tolerant liver transplant recipient with hepatitis C infection, under treatment with tacrolimus.
Biomaterial provider Giuseppe Tisone, University TOR VERGATA, Rome
Treatment protocol Ficoll PBMC isolation from peripheral blood
Growth protocol NA
Extracted molecule total RNA
Extraction protocol Tryzol extraction
Label biotin
Label protocol Standard Affymetrix protocol
 
Hybridization protocol Standard Affymetrix protocol
Scan protocol Standard Affymetrix protocol
Description see M.Martinez-Llordella et al. Am J Transplant
Data processing MAS 5
 
Submission date Aug 02, 2006
Last update date Aug 28, 2018
Contact name Alberto Sanchez-Fueyo
E-mail(s) afueyo@clinic.ub.es
Organization name Hospital Clinic Barcelona / IDIBAPS
Department Liver Transplantation Unit
Lab Transplantation Immunology
Street address Villarroel 170
City Barcelona
ZIP/Postal code 08036
Country Spain
 
Platform ID GPL570
Series (1)
GSE11881 Multiparameter Immune Profiling of Operational Tolerance in Liver Transplantation
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE MAS 5 signal
ABS_CALL detection (present/absent)
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 113.9 P 0.000127
AFFX-BioB-M_at 188.8 P 0.000044
AFFX-BioB-3_at 109.3 P 0.000044
AFFX-BioC-5_at 396.9 P 0.000044
AFFX-BioC-3_at 458.4 P 0.000044
AFFX-BioDn-5_at 767.2 P 0.000044
AFFX-BioDn-3_at 1369.8 P 0.000044
AFFX-CreX-5_at 3959.8 P 0.000052
AFFX-CreX-3_at 4877.4 P 0.000044
AFFX-DapX-5_at 3.5 A 0.300606
AFFX-DapX-M_at 5.3 A 0.368438
AFFX-DapX-3_at 2.1 A 0.876428
AFFX-LysX-5_at 0.8 A 0.425962
AFFX-LysX-M_at 2.3 A 0.712274
AFFX-LysX-3_at 0.5 A 0.737173
AFFX-PheX-5_at 0.8 A 0.949786
AFFX-PheX-M_at 0.5 A 0.941556
AFFX-PheX-3_at 9.3 A 0.147939
AFFX-ThrX-5_at 0.9 A 0.949771
AFFX-ThrX-M_at 0.6 A 0.883887

Total number of rows: 54675

Table truncated, full table size 1395 Kbytes.




Supplementary file Size Download File type/resource
GSM124675.CEL.gz 7.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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