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Sample GSM124575 Query DataSets for GSM124575
Status Public on Jun 25, 2008
Title Non-tolerant PBMCs_NoTOL_VHC_1
Sample type RNA
 
Source name Peripheral blood mononuclear cells
Organism Homo sapiens
Characteristics Peripheral blood obtained from non-tolerant liver transplant recipient with hepatitis C virus infection
Biomaterial provider Giuseppe Tisone, University TOR VERGATA, Rome
Treatment protocol Ficoll PBMC isolation from peripheral blood
Growth protocol NA
Extracted molecule total RNA
Extraction protocol Tryzol extraction
Label biotin
Label protocol Standard Affymetrix protocol
 
Hybridization protocol Standard Affymetrix protocol
Scan protocol Standard Affymetrix protocol
Description see M. Martinez-Llordella et al. Am J Transplant
Data processing MAS 5
 
Submission date Aug 02, 2006
Last update date Aug 28, 2018
Contact name Alberto Sanchez-Fueyo
E-mail(s) afueyo@clinic.ub.es
Organization name Hospital Clinic Barcelona / IDIBAPS
Department Liver Transplantation Unit
Lab Transplantation Immunology
Street address Villarroel 170
City Barcelona
ZIP/Postal code 08036
Country Spain
 
Platform ID GPL570
Series (1)
GSE11881 Multiparameter Immune Profiling of Operational Tolerance in Liver Transplantation
Relations
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE MAS 5 signal
ABS_CALL detection: present/absent
DETECTION P-VALUE

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 118.7 P 0.000081
AFFX-BioB-M_at 201.3 P 0.000044
AFFX-BioB-3_at 96.4 P 0.000044
AFFX-BioC-5_at 372.3 P 0.000044
AFFX-BioC-3_at 453.6 P 0.000044
AFFX-BioDn-5_at 772.7 P 0.000044
AFFX-BioDn-3_at 1363.9 P 0.000052
AFFX-CreX-5_at 4096.4 P 0.000052
AFFX-CreX-3_at 5140.9 P 0.000044
AFFX-DapX-5_at 0.5 A 0.749204
AFFX-DapX-M_at 2.7 A 0.804734
AFFX-DapX-3_at 0.8 A 0.749204
AFFX-LysX-5_at 3.9 A 0.239044
AFFX-LysX-M_at 2.7 A 0.5
AFFX-LysX-3_at 0.3 A 0.659352
AFFX-PheX-5_at 3.9 A 0.287726
AFFX-PheX-M_at 0.8 A 0.916426
AFFX-PheX-3_at 4.9 A 0.382589
AFFX-ThrX-5_at 0.5 A 0.966335
AFFX-ThrX-M_at 0.5 A 0.910522

Total number of rows: 54675

Table truncated, full table size 1397 Kbytes.




Supplementary file Size Download File type/resource
GSM124575.CEL.gz 7.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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