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Sample GSM124417 Query DataSets for GSM124417
Status Public on Aug 02, 2006
Title Spinal Cord SC_REP 1
Sample type RNA
 
Source name Spinal Cord (SC)
Organism Mus musculus
Characteristics Pooled SC from 4 male, 3 month-old C57BL/6J mice
Extracted molecule total RNA
Label biotin
 
Description Total RNA was extracted from pooled left and right lumbar (L1-L6) SC isolated from male, 3 month-old C57BL/6J mice
Data processing Data were obtained using the Affymetrix Microarray Suite version 5.0 (MAS 5.0) with default analysis settings and global scaling. Expression values were further normalized to the median expression for each chip and each gene across all samples.
 
Submission date Aug 01, 2006
Last update date Aug 01, 2006
Contact name Ramin Homayouni
E-mail(s) rhomayon@memphis.edu
Phone 901-678-1670
Organization name University of memphis
Department Bioinformatics
Street address 3774 Walker avenue
City Memphis
State/province TN
ZIP/Postal code 38152
Country USA
 
Platform ID GPL1261
Series (1)
GSE5425 Spinal cord and dorsal root ganglion gene expression

Data table header descriptions
ID_REF
VALUE MAS5-calculated signal intensity normalized to median expression value of each chip and each gene across all samples
ABS_CALL Per Affymetrix criteria, the call indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)

Data table
ID_REF VALUE ABS_CALL
1415670_at 0.9859944 P
1415671_at 0.78556675 P
1415672_at 1.0791308 P
1415673_at 0.9000069 P
1415674_a_at 0.55923873 P
1415675_at 0.8246686 P
1415676_a_at 0.6920685 P
1415677_at 0.5957004 P
1415678_at 0.76677877 P
1415679_at 0.797885 P
1415680_at 0.9229809 P
1415681_at 0.8478651 P
1415682_at 0.8753871 P
1415683_at 0.7177344 P
1415684_at 0.7829859 P
1415685_at 0.8829801 P
1415686_at 0.7644656 P
1415687_a_at 0.9142941 P
1415688_at 0.91350937 P
1415689_s_at 1.0413857 P

Total number of rows: 45101

Table truncated, full table size 1039 Kbytes.




Supplementary data files not provided

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