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GEO accession:
Sample GSM11830
Query DataSets for GSM11830
Status
Public on Nov 25, 2003
Title
C023 Renal Clear Cell Carcinoma U133A
Sample type
RNA
Source name
Trizol isolation of total RNA from Renal Clear Cell Carcinoma tissue
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Age = 72; Gender = Female; Right Kidney; Tumor Type = clear cell; Tumor Fuhrman Grade = 1; Tumor Capsule Penetration = true; Tumor Perinephric Fat Invasion = false; Tumor Renal Sinus Invasion = false; Tumor Renal Vein Invasion = false; Tumor Location: mid; Scaling Target = 500; Scaling Factor = 7.41; Raw Q = 3.76; Noise = 6.37; Background = 110.5.
Keywords = kidney
Keywords = renal
Keywords = RCC
Keywords = carcinoma
Keywords = cancer
Lot batch = 2004638
Submission date
Oct 20, 2003
Last update date
May 28, 2005
Contact name
Marc E. Lenburg
E-mail(s)
mlenburg@bu.edu
Phone
617-414-1375
Fax
617-414-1646
URL
http://gg.bu.edu
Organization name
Boston University School of Medicine
Department
Genetics and Genomics
Street address
715 Albany Street, E613B
City
Boston
State/province
MA
ZIP/Postal code
02130
Country
USA
Platform ID
GPL96
Series (1)
GSE781
Normal and Renal Cell Carcinoma Kidney Tissue, Human
Data table header descriptions
ID_REF
VALUE
MAS 5.0 Statistical Algorithm (mean scaled to 500)
ABS_CALL
MAS 5.0 Absent, Marginal, Present call with Alpha1 = 0.05, Alpha2 = 0.065
Data table
ID_REF
VALUE
ABS_CALL
AFFX-BioB-5_at
444.1
P
AFFX-BioB-M_at
1087.5
P
AFFX-BioB-3_at
502.4
P
AFFX-BioC-5_at
1480.6
P
AFFX-BioC-3_at
952.1
P
AFFX-BioDn-5_at
1161.5
P
AFFX-BioDn-3_at
7547.5
P
AFFX-CreX-5_at
13723.3
P
AFFX-CreX-3_at
18850.2
P
AFFX-DapX-5_at
61.7
A
AFFX-DapX-M_at
149.6
A
AFFX-DapX-3_at
27.7
A
AFFX-LysX-5_at
11
A
AFFX-LysX-M_at
62.4
A
AFFX-LysX-3_at
19.5
A
AFFX-PheX-5_at
9.2
A
AFFX-PheX-M_at
20.8
A
AFFX-PheX-3_at
26
A
AFFX-ThrX-5_at
18.5
A
AFFX-ThrX-M_at
31.2
A
Total number of rows:
22283
Table truncated, full table size
404 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM11830.CEL.gz
3.4 Mb
(ftp)
(http)
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