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Sample GSM113942 Query DataSets for GSM113942
Status Public on Aug 24, 2007
Title Normal primary thyroid cells, thyroid #5, control treatment
Sample type RNA
Source name thyroid
Organism Homo sapiens
Characteristics Normal primary thyroid cells, control (vehicle) treatment
Extracted molecule total RNA
Extraction protocol Total RNA was extracted from the tissue lysate using an RNeasy kit (Qiagen).
Label biotin
Label protocol 5 µg of total RNA was processed to produce biotinylated cRNA targets.
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description Normal primary thyroid cells, thyroid #5, control treatment
Data processing Ann Arbor quantile-normalized trimmed-mean method
Submission date Jun 12, 2006
Last update date Aug 24, 2007
Contact name Rork Kuick
Phone 734-936-9241
Organization name University of Michigan
Street address University of Michigan, SPH II, 1415 Washington Heights, Room M2533
City Ann Arbor
State/province MI
ZIP/Postal code 48109-2029
Country USA
Platform ID GPL571
Series (1)
GSE5054 Effect of INF-gamma and IL1-beta on thyroid cells

Data table header descriptions
VALUE quantile-normalized trimmed-mean, log-transformed with log(max(x+50,0)+50) using base 10 logarithms

Data table
201963_at 3.275311355
207275_s_at 2.982271233
202912_at 2.469822016
205013_s_at 2.225309282
206513_at 2.283301229
205568_at 1.991226076
205870_at 2.445604203
202357_s_at 2.40654018
207571_x_at 2.413299764
210785_s_at 2.463892989
221245_s_at 3.001300933
220066_at 2.041392685
205467_at 2.338456494
209310_s_at 2.283301229
1405_i_at 1.954242509
204655_at 2.217483944
208075_s_at 1.973127854
214038_at 1.939519253
205692_s_at 2.260071388
204440_at 2.344392274

Total number of rows: 22277

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM113942.CEL.gz 3.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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