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GEO accession:
Sample GSM113372
Query DataSets for GSM113372
Status
Public on Jul 27, 2006
Title
25 uM chlorpyrifos batch 2
Sample type
RNA
Source name
25 uM chlorpyrifos batch 2
Organism
Homo sapiens
Characteristics
astrocytes from second trimester human fetal brains
Extracted molecule
total RNA
Label
biotin
Hybridization protocol
standard Affymetrix procedures
Scan protocol
standard Affymetrix procedures
Description
astrocytes from second trimester (14-19 weeks) human fetal brains
Data processing
Affymetrix Microarray Suite version 5.0
Submission date
Jun 08, 2006
Last update date
Jul 27, 2006
Contact name
Sarah Mense
E-mail(s)
smm2123@columbia.edu
Organization name
Columbia University
Department
Environmental Health Sciences
Lab
Dr. Zhang
Street address
722 West 168th Street
City
New York
State/province
NY
ZIP/Postal code
10032
Country
USA
Platform ID
GPL570
Series (1)
GSE5023
The Insecticides Cyfluthrin & Chlorpyrifos Alter Expression of Genes with Diverse Functions in Primary Human Astrocytes
Data table header descriptions
ID_REF
Affymetrix ID reference
VALUE
GCOS 1.2-calculated Signal intensity
ABS_CALL
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE
'detection p-value', p-value that indicates the significance level of the detection call
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
329.7
P
0.000857
AFFX-BioB-M_at
420.3
P
0.00007
AFFX-BioB-3_at
297.1
P
0.000446
AFFX-BioC-5_at
830.7
P
0.000044
AFFX-BioC-3_at
773.6
P
0.000052
AFFX-BioDn-5_at
1968.8
P
0.000044
AFFX-BioDn-3_at
4810.2
P
0.00006
AFFX-CreX-5_at
8717.8
P
0.000044
AFFX-CreX-3_at
11150.9
P
0.000044
AFFX-DapX-5_at
40.2
A
0.102145
AFFX-DapX-M_at
31.8
A
0.5
AFFX-DapX-3_at
3.3
A
0.963431
AFFX-LysX-5_at
31.5
A
0.131361
AFFX-LysX-M_at
4.4
A
0.852061
AFFX-LysX-3_at
1.9
A
0.712274
AFFX-PheX-5_at
12.5
A
0.645547
AFFX-PheX-M_at
5.3
A
0.631573
AFFX-PheX-3_at
8.2
A
0.824672
AFFX-ThrX-5_at
31.1
A
0.275146
AFFX-ThrX-M_at
4.5
A
0.724924
Total number of rows:
54675
Table truncated, full table size
1429 Kbytes
.
Supplementary data files not provided
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