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Sample GSM1132927 Query DataSets for GSM1132927
Status Public on Jun 24, 2014
Title Neuroblastoma-MYCN-Tum34
Sample type RNA
 
Source name MYCN tumor
Organism Mus musculus
Characteristics strain: 129S2 or 129B6F1
tissue: Neuroblastoma
Treatment protocol N/A
Growth protocol N/A
Extracted molecule total RNA
Extraction protocol RNA was collected from tumors using the miRNeasy kit (Qiagen) according to the manufacturer's instructions.
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol
 
Hybridization protocol Hybridization performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions. Samples were hybridized to Affymetrix MOE430.2 array
Scan protocol Scanning were performed by Institut Curie Affymetrix Microarray Core Facility according to the manufacturer's instructions
Data processing Arrays were normalized by the GCRMA procedure using Brainarray annotations (V.14.0.0, ENTREZG)
 
Submission date May 02, 2013
Last update date Sep 08, 2015
Contact name Alex Cazes
E-mail(s) alex.cazes@curie.fr
Organization name Institut Curie
Street address 26 rue d'Ulm
City paris
State/province Please select...
ZIP/Postal code 75005
Country France
 
Platform ID GPL16225
Series (1)
GSE46583 Expression data from neuroblastoma of TH-MYCN/KI Alk mice
Relations
Reanalyzed by GSE72678

Data table header descriptions
ID_REF
VALUE Normalized log2 ratio

Data table
ID_REF VALUE
100008567_at 5.750328312
100009600_at 2.095190248
100012_at 2.459903231
100017_at 3.955298516
100019_at 8.514553355
100034251_at 9.304771948
100034739_at 2.198505809
100034748_at 3.965342818
100036520_at 2.712438352
100036521_at 8.69048675
100036523_at 2.640625431
100036768_at 2.467374427
100037258_at 7.952759456
100037262_at 2.002664381
100037278_at 6.499965609
100038347_at 5.442803477
100038358_at 2.092699395
100038371_at 2.815467236
100038392_at 2.303203229
100038398_at 2.898270048

Total number of rows: 17306

Table truncated, full table size 359 Kbytes.




Supplementary file Size Download File type/resource
GSM1132927_MM24_ARN0007_s1h1_Moe430p2.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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