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Sample GSM1125315 Query DataSets for GSM1125315
Status Public on Apr 22, 2013
Title genomic DNA from CD14 B-cells_C121 (BeadChip)
Sample type genomic
Source name C121
Organism Homo sapiens
Characteristics individual identifier: C121
monozygotic twin relationship: MZ twin of C11
cell type: CD14 cells
Extracted molecule genomic DNA
Extraction protocol Genomic DNA was extracted using the Qiagen DNeasy kit.
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description Sample name: C121
normal CD14 cells
Data processing GenomeStudio softwarre
Submission date Apr 18, 2013
Last update date Apr 22, 2013
Contact name Thomas A Down
Organization name University of Cambridge
Department WT/CRUK Gurdon Institute
Street address Tennis Court Road
City Cambridge
ZIP/Postal code CB2 1QN
Country United Kingdom
Platform ID GPL13534
Series (2)
GSE46168 Inactive or moderately active human promoters are enriched for inter-individual epialleles [Methylation BeadChip]
GSE46220 Inactive or moderately active human promoters are enriched for inter-individual epialleles

Data table header descriptions
VALUE Average Beta

Data table
cg00000029 0.4261885
cg00000108 0.9132629
cg00000109 0.8858325
cg00000165 0.1649066
cg00000236 0.6569598
cg00000289 0.5481507
cg00000292 0.7848705
cg00000321 0.2867052
cg00000363 0.3998866
cg00000622 0.01800175
cg00000658 0.7749392
cg00000714 0.1593994
cg00000721 0.884904
cg00000734 0.07862191
cg00000769 0.05005299
cg00000807 0.8472856
cg00000884 0.8213072
cg00000905 0.09410044
cg00000924 0.46892
cg00000948 0.8262252

Total number of rows: 485577

Table truncated, full table size 10050 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

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