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Sample GSM1125314 Query DataSets for GSM1125314
Status Public on Apr 22, 2013
Title genomic DNA from CD14 B-cells_C112 (BeadChip)
Sample type genomic
Source name C112
Organism Homo sapiens
Characteristics individual identifier: C112
monozygotic twin relationship: MZ twin of C12
cell type: CD14 cells
Extracted molecule genomic DNA
Extraction protocol Genomic DNA was extracted using the Qiagen DNeasy kit.
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description Sample name: C112
normal CD14 cells
Data processing GenomeStudio softwarre
Submission date Apr 18, 2013
Last update date Apr 22, 2013
Contact name Thomas A Down
Organization name University of Cambridge
Department WT/CRUK Gurdon Institute
Street address Tennis Court Road
City Cambridge
ZIP/Postal code CB2 1QN
Country United Kingdom
Platform ID GPL13534
Series (2)
GSE46168 Inactive or moderately active human promoters are enriched for inter-individual epialleles [Methylation BeadChip]
GSE46220 Inactive or moderately active human promoters are enriched for inter-individual epialleles

Data table header descriptions
VALUE Average Beta

Data table
cg00000029 0.4489197
cg00000108 0.9143527
cg00000109 0.8560751
cg00000165 0.1975583
cg00000236 0.6744716
cg00000289 0.6390777
cg00000292 0.8034599
cg00000321 0.3710563
cg00000363 0.4120269
cg00000622 0.01874929
cg00000658 0.8307819
cg00000714 0.1716064
cg00000721 0.9149871
cg00000734 0.08382055
cg00000769 0.04216187
cg00000807 0.8657606
cg00000884 0.86994
cg00000905 0.1060374
cg00000924 0.5167637
cg00000948 0.8826537

Total number of rows: 485577

Table truncated, full table size 10038 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

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