GEO Accession viewer

NCBI > GEO > Accession Display

Not logged in | Login

GEO help: Mouse over screen elements for information.

Sample GSM108389

Query DataSets for GSM108389

Status

Public on Jun 27, 2006

Title

M010718_B

Sample type

RNA

Source name

culture of cutaneous metastasis of melanoma

Organism

Homo sapiens

Characteristics

Gender: male
Source tissue: cutaneous metastasis of melanoma
Tumor stage: IV
BRAF: wt
NRAS: NRASQ61K

Extracted molecule

total RNA

Label

biotin

Description

Culture was derived from a cutanous metastasis of melanoma of the right thigh.

Data processing

MAS5.0

Submission date

May 11, 2006

Last update date

Jun 27, 2006

Contact name

Keith S Hoek

E-mail(s)

keith.hoek@usz.ch

URL

http://www.jurmo.ch/work.html

Organization name

Currently unaffilliated

Street address

private

City

Zürich

ZIP/Postal code

8004

Country

Switzerland

Platform ID

GPL97

Series (2)

GSE4840	Metastatic potential of melanomas defined by specific gene expression profiles with no BRAF signature (Zürich).
GSE4845	Metastatic potential of melanomas defined by specific gene expression profiles with no BRAF signature.

Data table header descriptions
ID_REF
VALUE	Scaled signal intensity data
ABS_CALL	Detection call: Present (P), Marginal (M) or Absent (A)

Data table
ID_REF	VALUE	ABS_CALL
AFFX-BioB-5_at	1002.6	P
AFFX-BioB-M_at	2015.7	P
AFFX-BioB-3_at	660.1	P
AFFX-BioC-5_at	2405.2	P
AFFX-BioC-3_at	2136	P
AFFX-BioDn-5_at	2218.4	P
AFFX-BioDn-3_at	17679.2	P
AFFX-CreX-5_at	24007.4	P
AFFX-CreX-3_at	37526.5	P
AFFX-DapX-5_at	72.1	A
AFFX-DapX-M_at	146.9	A
AFFX-DapX-3_at	17.2	A
AFFX-LysX-5_at	56.4	A
AFFX-LysX-M_at	108.2	A
AFFX-LysX-3_at	11	A
AFFX-PheX-5_at	15.8	A
AFFX-PheX-M_at	9.6	A
AFFX-PheX-3_at	115.7	A
AFFX-ThrX-5_at	20.7	A
AFFX-ThrX-M_at	36	A

Total number of rows: 22645

Table truncated, full table size 398 Kbytes.

Supplementary data files not provided